Rhodococcus sp. 11-3: KZJ41_08870
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Entry
KZJ41_08870 CDS
T10209
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhou Rhodococcus sp. 11-3
Pathway
rhou03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KZJ41_08870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhou03400
]
KZJ41_08870
Enzymes [BR:
rhou01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KZJ41_08870
DNA repair and recombination proteins [BR:
rhou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KZJ41_08870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
TAF1C_HB
Motif
Other DBs
NCBI-ProteinID:
USC16959
LinkDB
All DBs
Position
complement(1879537..1880271)
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AA seq
244 aa
AA seq
DB search
MNPIDRPPDLAALDARLIECRACPRLVAWREQVGREKRAAYRDEEYWARPVPGFGPADAS
LLIVGLAPAAHGGNRTGRMFTGDRSGDFLYAALHAAGLASQPTATHRGDGLELFGTRVTS
PVHCAPPANRPTPQERDTCRTWLDAELQLLAPTLRSVVVLGGFGWRALLPVLDDAGWAVP
RPRPGFGHGTAVELRPRGDAADRRPLHVFGCYHVSQQNTFTGRLTPAMLTAVLTDAARAA
GLRS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgatcgatcggcccccggacctggccgcgctcgacgcgcgcctgatcgagtgc
cgggcttgcccgcgcctggtcgcgtggcgggagcaggtgggccgcgagaagcgtgccgca
taccgcgacgaggagtactgggcgcgtcccgtgcccgggttcggaccggcggatgcgtcc
ctgctgatcgtgggcctggccccggccgcgcacggcggcaaccggaccggccggatgttc
accggcgaccgctcgggcgacttcctgtacgccgcgctgcacgcggcgggcctggcgtcg
cagcccaccgcgacgcaccgcggcgacggcctcgaactgttcggcacccgcgtcacgtcg
ccggtgcactgcgcgccgccggccaaccggccgacgccgcaggagcgggacacgtgccgc
acctggctcgacgcggagctacagctgctggcgccgacgttgcgctcggtcgtggtgctc
ggcggcttcggatggcgggcgctgctcccggtgctcgacgacgccggctgggccgtgccg
cgtccccgccccggattcgggcacggcacggcggtggaactgcggccgcgcggcgacgct
gcggaccgcaggccgctacacgtgttcggttgctatcacgtgagccagcagaacacgttc
accggccggctcaccccggccatgctcaccgccgtgctcacggacgcggcgcgggctgcc
ggactgcgctcgtga
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