Rhodococcus sp. 11-3: KZJ41_10630
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Entry
KZJ41_10630 CDS
T10209
Name
(GenBank) TerD family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhou Rhodococcus sp. 11-3
Pathway
rhou03030
DNA replication
rhou03430
Mismatch repair
rhou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KZJ41_10630
03430 Mismatch repair
KZJ41_10630
03440 Homologous recombination
KZJ41_10630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhou03032
]
KZJ41_10630
03400 DNA repair and recombination proteins [BR:
rhou03400
]
KZJ41_10630
Enzymes [BR:
rhou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KZJ41_10630
DNA replication proteins [BR:
rhou03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KZJ41_10630
DNA repair and recombination proteins [BR:
rhou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KZJ41_10630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
DNA_pol_A_exo1
3HCDH_RFF
Motif
Other DBs
NCBI-ProteinID:
USC17286
LinkDB
All DBs
Position
2214559..2216415
Genome browser
AA seq
618 aa
AA seq
DB search
MQVIDTLSHASGSRTLPKGHRWVVVDVETSGLRAYAHRVLSVAALVLREDGSVEQEYSTL
VDPGCDPGPVHVHRLTRERLAGAPRFEQIAGELAEVLDGGTIVAHNAAFDYGFLDAEFRR
AGTEIPARHRLCTLALSRRLELDVPDHKLSTLAAHWQVQQLLEHDAYDDARVLSEVFVRS
ALLAESLQLPLPVVDCLSRRPAYPDSVPRVPCEWKNPGRLSLDVGLVQGMKVVVTGQTVT
PRVPLAGRMADAGLDVMNSVSRQTSVVVCNDPGVQTGKIRKAMAEGIPVVTEQQLEEMLT
RVIPGEPKMRPVVEVAAPAAEPVIEPPPQAAPAEPLADVPSLPERMLTGQKPKLWQGRRV
LLLGGTHLDAVLMRSRLVQLGARPSLNLTAAVTDVLMLEGGDSDRRMPRITARELPVLTM
TDISAAVEKGVVPPHMRIESRLSAPALARGEVIDLPARKTSWTVNVAWRAETDDFDVDVV
AFLLGEDEKVDSDDDFVFYNNPSAEDGAVELSIDGSSEQSVRLDLAALPDECARIAIAAA
IDGERTFGELGAVSVSVDGEDGTAATFVLDAGTTERTMVLTEIYRRAGKWRLRAVGQGYD
DDLGGLVALYGVDVEEGN
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtgatcgacacgttgtcgcacgcgtcgggttcgcggacgctgccgaagggtcat
cgctgggtggtcgtcgacgtcgagacctccggcctgcgcgcctacgcgcatcgggtgctc
agcgtcgccgcgctggtgttgcgggaggacggcagcgtcgagcaggagtactcgacgctc
gtcgacccgggttgcgaccccggcccggtccacgtgcaccggttgacgcgcgaacggctc
gccggtgccccgcgcttcgagcagatcgccggcgaactcgccgaggtgctggacggcggg
accatcgtcgcccacaacgcggccttcgactacggattcctcgacgccgagttccggcgc
gccggaaccgagatcccggccagacaccggctgtgcactctcgccctgtcgaggcggctc
gaactcgacgtgcccgatcacaaactctccaccctggccgcccactggcaggtccagcag
ttgctcgagcacgacgcctacgacgacgcccgcgtcctcagcgaggtcttcgtacgcagc
gccctgctcgccgagagcctgcagctcccgctgccggtggtcgactgcctcagccgcagg
cccgcctacccggactccgtgccgcgcgtgccgtgcgagtggaagaacccgggacgcctg
tcgctggacgtcggcctggtgcaggggatgaaggtggtcgtcacggggcagacggtgacg
ccgcgggtcccgctcgccggccggatggccgacgccggcctcgacgtgatgaactccgtc
agtcgccagacgagcgtggtcgtgtgtaacgaccccggcgtgcagacgggcaagatccgc
aaggcgatggccgagggcattcccgtcgtcaccgagcagcaactcgaagagatgctcacc
cgggtgattccaggcgaaccgaagatgcgtccggtggtcgaggtggccgcgcccgctgct
gagcccgtgatcgaacctcctccgcaggcggcgcctgcggagcccctcgccgatgtaccg
agcctgcccgagcggatgctcacgggacagaagccgaagctgtggcagggccggcgggtg
ctgctcctcggcggcacccacctcgacgccgtgctcatgcgctcgcgtctcgtccagctc
ggtgcacgcccgtcgctcaacctcaccgcggcggtcacggacgtgctgatgctggaaggc
ggcgacagcgaccggcgcatgccgcgcatcaccgcgcgcgagctccccgtcctgaccatg
acggacatcagcgccgcggtggagaagggcgtcgtgccgccgcacatgcgcatcgagtcc
cgcctctccgcgccggcgctcgcccgaggcgaggtcatcgacctgccggcgcggaagacg
tcgtggacggtcaacgtcgcgtggcgcgccgagacggacgacttcgacgtcgacgtcgtc
gccttcctgctgggggaggatgaaaaggtcgacagcgacgacgacttcgtcttctacaac
aacccatccgccgaggacggcgcggtcgagttgtcgatcgacggcagtagcgaacagagc
gtgcggctcgatctcgccgcgctgcccgacgaatgcgcgcgcatcgcgatcgccgcggcc
atcgacggcgagcgcaccttcggcgaactgggggctgtgtccgtaagcgtcgacggtgag
gacggcacggcggcgacgttcgtactcgacgccgggactaccgaacggaccatggtgctc
accgagatctatcggcgggcggggaagtggcggctgcgcgcggtggggcaggggtacgac
gacgacctcggcgggctcgtcgcgctgtacggcgtggacgtcgaggaaggcaattga
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