Rhodococcus sp. 11-3: KZJ41_12725
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Entry
KZJ41_12725 CDS
T10209
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhou Rhodococcus sp. 11-3
Pathway
rhou00061
Fatty acid biosynthesis
rhou00071
Fatty acid degradation
rhou01100
Metabolic pathways
rhou01212
Fatty acid metabolism
rhou02024
Quorum sensing
rhou04146
Peroxisome
Module
rhou_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KZJ41_12725
00071 Fatty acid degradation
KZJ41_12725
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KZJ41_12725
09145 Cellular community - prokaryotes
02024 Quorum sensing
KZJ41_12725
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhou01004
]
KZJ41_12725
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhou04147
]
KZJ41_12725
Enzymes [BR:
rhou01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KZJ41_12725
Lipid biosynthesis proteins [BR:
rhou01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KZJ41_12725
Exosome [BR:
rhou04147
]
Exosomal proteins
Exosomal proteins of breast milk
KZJ41_12725
Exosomal proteins of breast cancer cells
KZJ41_12725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
USC17647
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All DBs
Position
2681659..2683341
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AA seq
560 aa
AA seq
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MGTGMERIWLDSYAEGVPSDIAPPEHSLVDMLEASVARFGPRPALEFFGAELTYSQLGDR
VHRAAEGLRRLGVRPGDRVALVLPNCPEHVIAFYAVLRIGGVVVEHNPLYTGEEMAHQFA
DHGATVAIAWDKVCPLLQRIAGDTAVEHIVAVNITRSMPWSKRLALTLPVPRARTLRDAL
TGPAPGTIPWQRLLADGPLDPEHPRPSVGDLAVVQYTSGTTGTPKGAMLTHSNLGANAAQ
GRAWVPGLVDGAEVVYAVLPMFHAYGLTLCVTFAMSIGARLVLFPKFDVDLVLAAAKKHP
PTFMPAVPPIYERLARAARERSVDLTSARWSISGAMPLPTETLELWEAVTGGVLVEGYGL
TETSPVAVGNPIGLARRPGAVGVPFPSTEIRVVDPADPERDVEPGQRGELLIRGPQVFSG
YWNKPEQTAEALLDGGWFRTGDIVQVDRDGFVTVVDRIKELIITGGFNVMPSEVEAALRL
FPGVVDAAVVGLPTPDGSEEVVAAVLVSGDDFDPEAAREHCRSRLAAYKVPRRVVVVDDL
PRSLIGKVLRRQVRESLLVG
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaccggtatggaacggatctggctcgacagctacgccgagggggtgccgtcggac
atcgcaccccccgagcactcgctggtcgacatgctggaggcgtcggtcgctcggttcggg
ccacgtccggcgctcgagttcttcggcgcggaactgacctattcgcaactcggcgaccgg
gtgcaccgtgccgcggaggggctgcgacggctcggcgtgcgccccggcgaccgggtggcg
ctcgtcctgccgaactgtccggagcacgtgatcgcgttctatgcggtcctgcggatcggc
ggcgtggtggtcgagcacaatccgctctacaccggcgaggagatggcccaccagttcgcg
gatcacggcgccacggtggcgatcgcctgggacaaggtctgtccgctgctgcagcggatc
gccggggacacggccgtcgagcacatcgtggcggtgaacatcactcgttcgatgccgtgg
tccaagcggctcgcgctcaccctccccgtcccgagagcgcgcacgttgcgggacgcgctg
acggggccggcgccgggaacgattccgtggcagcggttgctggccgacggacccctcgac
ccggagcatccgcgcccctccgtcggcgatctggcggtcgtccagtacacgagcggcacc
accggcaccccgaagggcgcgatgctcacgcactcgaacctcggcgccaacgccgcgcag
ggccgcgcctgggtgccggggctggtcgacggcgcagaggtcgtctacgcggtgctgccg
atgttccacgcctacgggctcaccctgtgtgtgaccttcgcgatgagcatcggcgcccgt
ctggtgctgttccccaagttcgacgtggatctggtgctcgccgccgcgaagaagcaccca
cccacgttcatgcccgcggtgccgccgatctacgagcgcctcgcccgcgcggcccgggag
cggtcggtggatctgacgtcggcgcgctggtcgatttccggggcgatgcccttgccgacg
gagacactggaactgtgggaggcggtcaccgggggcgtgctggtcgaggggtacgggctg
accgagacgtcgccggtcgcggtcggcaatcccatcggactcgcccgccggcccggtgcc
gtcggagttcccttcccgagcaccgagatccgggtggtcgatccggccgaccctgagcgc
gacgtcgaacccgggcagcggggagagctgctgatccgcggaccgcaggtgttctccgga
tactggaacaagcccgaacagacggcggaggcgctgctcgacggcggctggttccggacc
ggtgacatcgtccaggtcgaccgcgacggattcgtcacggtcgtggaccggatcaaggaa
ctgatcatcaccggtggcttcaacgtcatgccgtccgaggtcgaagcggcgctgcggctg
ttcccgggagtagtcgacgccgccgtggtcggtctgccgacccctgacggcagcgaggag
gtggtggcggcggtgctggtctcgggcgacgacttcgaccccgaggcggcgcgggagcac
tgccgttcgcgcctggccgcctacaaggtcccgcggcgtgtggtggtggtggacgacctg
ccgcggtccctgatcgggaaggtgctccgccggcaggtccgcgagtccctcctcgtcggc
tga
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