Rhodococcus sp. 11-3: KZJ41_12820
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Entry
KZJ41_12820 CDS
T10209
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhou Rhodococcus sp. 11-3
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhou03016
]
KZJ41_12820 (truB)
Enzymes [BR:
rhou01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KZJ41_12820 (truB)
Transfer RNA biogenesis [BR:
rhou03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KZJ41_12820 (truB)
Prokaryotic type
KZJ41_12820 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
USC17664
LinkDB
All DBs
Position
2701933..2702841
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AA seq
302 aa
AA seq
DB search
MSASENPALARAGLLVVDKDPGMTSHDVVARCRRLLGTRKVGHAGTLDPMATGVLVLGVE
RATKMLGLLALTTKAYSATIRLGQSTVTDDAEGEVLATTDASAVADEAIAAAVAALTGEI
SQVPASVSAIKIDGKRAYARMREGETVELAARPVTVSRFEVLSRRTTSDGFVDLDVEVEC
SSGTYIRALARDLGAALGVGAHLTALRRTRVGPFGLEHARTLAQLEESPTVSLDIDAAVR
TAFPCRDVTAAEAELLANGRWLDPVGIPGVYAAIDPSGRAAALLQEKGKRASAVFVVRPA
TM
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgcctccgagaaccccgccctcgcccgtgccggcctgctcgtcgtcgacaaggac
ccgggtatgaccagccacgacgtggtggcccgctgccggcggctgctcggcacccgcaag
gtcggtcatgccggcaccctcgacccgatggcgacgggcgtgctcgtgctcggggtggag
cgcgcgacgaagatgctgggcctgctcgccctcaccaccaaggcgtattcggcgacgatc
cggctcgggcagagcaccgtcaccgacgacgccgagggtgaggtgctcgcgaccaccgac
gcctccgccgtcgcggacgaggcgatcgcggcggccgttgccgcgctcacgggggagatc
tcccaggtgcctgccagcgtcagcgcgatcaagatcgacggcaagcgcgcctacgcccgg
atgcgcgagggggagaccgtcgagctcgcggcccggccggtcacggtctcgcggttcgag
gtgctgtcccggcggaccacctcggacgggttcgtcgatctcgacgtcgaggtggagtgc
tcgtccggcacctacatccgggcgctggcccgggatctgggggccgccctgggcgtcggc
gcgcacctgacggcgctgcggcgcacccgggtcggcccgttcgggctcgagcacgcccgc
acgctcgcccagctcgaggagagcccgaccgtgagcctggacatcgatgcagccgtccgc
accgcgttcccgtgccgcgacgtcaccgcggcggaggcggaactgctggcgaacggccgg
tggctggatccggtggggattcccggcgtgtacgcggcgatcgacccgtccggccgggcc
gcggcgctgctgcaggagaagggcaagcgggcctcggcagtgttcgtcgtgcgcccggcc
accatgtag
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integrated database retrieval system
