Rhodococcus sp. 11-3: KZJ41_14835
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Entry
KZJ41_14835 CDS
T10209
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rhou Rhodococcus sp. 11-3
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rhou03051
]
KZJ41_14835 (pafA)
Enzymes [BR:
rhou01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
KZJ41_14835 (pafA)
Proteasome [BR:
rhou03051
]
Prokaryotic proteasome
Bacterial regulatory particles
KZJ41_14835 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
DUF244
Motif
Other DBs
NCBI-ProteinID:
USC13030
LinkDB
All DBs
Position
3136246..3137604
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDDLLQLVEHDHAGERVLEELLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSY
GCHENYLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSEPTTMLKVGSASLVLEMIEAGVAF
RDFALDNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYHGRAVEYLRTREPDPHVE
QVVDLWGRVLDAVESQDFAKVDTEIDWVIKRKLFQRYQDRYDLELSDPKIAQLDLAYHDI
KRGRGVFDLLQRKGLAARLTDDESVDAAVHTPPQTTRAKLRGDFIAAAQDAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgacgaatcatgggcatcgagacggagttcggcgtcacgtgcaccttccacggg
caccggcggctgagccccgacgaggtcgcccggtatctgttccgtcgggtggtgtcctgg
ggccgcagctcgaacgtgttcctccgcaacggggcgcgcctgtacctggacgtgggttcg
cacccggagtacgcgaccgccgagtgcgacgacctcctccagctcgtcgagcacgaccac
gccggggagcgggtgctcgaggaattgctgatcgacgccgaacagcgcctcgccgaggaa
ggcatcggcggcgacatctacctgttcaagaacaacaccgactcggccggcaactcctac
ggctgccacgagaactacctcgtggtgcgggccggggagttctcccgcatctcggacgtg
ctgctgccgttcctggtgacgcggcagctgatctgcggcgccgggaaggtgctgcagacc
cccaaggccgcgacctactgcctgtcgcagcgcgccgagcacatctgggagggcgtgtcg
tcggcgaccacccggtcccggccgatcatcaacacccgcgacgagccgcacgccgacgcc
gagaagtaccggcggctgcacgtgatcgtcggcgactcgaacatgtccgagcccaccacg
atgctcaaggtcggctccgcgtcgctggtgctcgagatgatcgaggccggcgtggcgttc
cgcgacttcgccctcgacaacccgatccgggccatccgggaggtcagccacgacctgacc
gggcggcggccggtgcgcctggccgggggccggcaggccagcgccctcgacatccagcgc
gagtaccacggccgggcggtggagtacctgcgcacccgcgaacccgatccgcacgtcgag
caggtggtggatctgtggggccgggtgctcgacgcggtcgagtcgcaggacttcgcgaag
gtggacaccgagatcgactgggtgatcaaacgcaagttgttccagcgctaccaggaccgc
tacgacctggagctgtccgacccgaagatcgcccagctggatctggcgtaccacgacatc
aagcgcgggcgcggggtgttcgatctgctccagcgcaaggggctggcggcgcggctgacc
gacgacgagtccgtcgacgcggccgtgcacaccccgccgcagaccacccgggcgaagctg
cgcggcgacttcatcgccgccgcgcaggacgccggccgggacttcaccgtggactgggtg
cacctcaagctcaacgaccaggcgcagcgcacggtgctgtgcaaggacccgttccgctcc
gtcgacgagcgcgtcgaacggctcatcgcctcgatgtag
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