Rhodococcus sp. 11-3: KZJ41_16900
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Entry
KZJ41_16900 CDS
T10209
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhou Rhodococcus sp. 11-3
Pathway
rhou00061
Fatty acid biosynthesis
rhou00071
Fatty acid degradation
rhou01100
Metabolic pathways
rhou01212
Fatty acid metabolism
rhou02024
Quorum sensing
rhou04146
Peroxisome
Module
rhou_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KZJ41_16900
00071 Fatty acid degradation
KZJ41_16900
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KZJ41_16900
09145 Cellular community - prokaryotes
02024 Quorum sensing
KZJ41_16900
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhou01004
]
KZJ41_16900
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhou04147
]
KZJ41_16900
Enzymes [BR:
rhou01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KZJ41_16900
Lipid biosynthesis proteins [BR:
rhou01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KZJ41_16900
Exosome [BR:
rhou04147
]
Exosomal proteins
Exosomal proteins of breast milk
KZJ41_16900
Exosomal proteins of breast cancer cells
KZJ41_16900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
sCache_3_2
Motif
Other DBs
NCBI-ProteinID:
USC13387
LinkDB
All DBs
Position
complement(3641230..3643068)
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AA seq
612 aa
AA seq
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MAALRVADEPVDSSKLDNRAPSVARLFVDRVAATPEAEAFRYPKGDGWESVTWRQVGERV
DTLAAGLIALGVQPQDPVAVASSTRYEWVLADFAVMCAGAATTTIYPTTNAPDVAFIVAN
SGSGVVIAEDRTQVDKLVAHRADLPKVRTVVVIDGEGDGDWVISLADLEDRGRKLLAESP
RVVADRVDAIRPEQLASIMYTSGTTGKPKGVLLPHSGWTYTAAAVDAVNILGPDDLNFLW
LPLSHAFGKVMLALPLQIGFTTVIDGRVEKIVENLAVVHPTFMGAAPRIFEKAHARIEAM
IAEEGGAKKKIFDWALGVGLRVSQARQEDRAPSRLDRLRYRLADRLVFSTIKERFGGRLR
FFVSAAAPLDRAVAQWFDAAGIIILEGYGLTETSAASFINRPYAYRLGTVGWPFPGTEVR
IAGDGEVLLRGPGVMDGYHERPDATAEALEPDGWFHTGDIGELDADGFLRITDRKKDLFK
TSQGKYVAPSAISATFKGICPYASEIVVYGESRPYCVALVGLDAEAITEWADKNGMAGRE
FGEIARDERTRELIAGCIDRLNDRLNRWEQIKKFTVLDRELSIEAGDLTPSMKLRRKLVV
DNFADRIEQLYV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgctgcgggtggcggacgaaccggtggactcttcgaagctcgacaaccgggcg
ccgtcggtggcccggctgttcgtcgaccgggttgcggcgactcccgaggccgaggccttc
cggtatccgaagggtgacggctgggagagcgtgacctggaggcaggtgggcgagcgggtc
gacacgctcgccgcgggcctgatcgccctgggggtccagcctcaggatccggtcgcggtc
gcgtcgtcgacccggtacgaatgggtgctcgccgacttcgcggtgatgtgcgccggtgcc
gcgaccaccacgatctaccccacgaccaacgcccccgacgtcgccttcatcgtcgccaat
tcgggcagcggcgtcgtgatcgcggaggaccggacccaggtcgacaagctcgtcgcccac
cgcgccgacctgccgaaggtgcggaccgtggtggtcatcgacggcgagggcgacggggac
tgggtcatcagcctcgccgacctggaggacaggggccggaaactgcttgccgagtcgccc
cgcgtcgtcgccgaccgggtcgacgcgatccggcccgaacagttggccagcatcatgtac
acctccggcaccaccgggaagccgaagggcgtgctgctgccgcattcggggtggacgtac
acggctgcggccgtcgacgcggtgaacatcctgggacccgacgatctgaacttcctctgg
ctgccgctgtcgcacgccttcggcaaggtcatgctggcgctgcccctgcagatcggtttc
accaccgtgatcgacggccgcgtcgagaagatcgtcgagaacctcgccgtcgtgcatccc
accttcatgggcgcggcgccgcgcatcttcgagaaggcacacgcccgcatcgaggcgatg
atcgccgaggagggcggggcgaagaagaagatcttcgactgggccctcggcgtcggactg
cgtgtctcgcaggcccggcaggaggaccgcgcaccctctcgcctcgaccggctccggtat
cggctcgccgaccgtctcgtgttctccaccatcaaggagcgtttcggcggtcgcctgcgg
ttcttcgtctcggcggcggccccgctcgaccgtgccgtggcgcagtggttcgacgccgcc
ggcatcatcatcctcgaggggtacggcctgaccgagacgtccgccgcgtcgttcatcaac
cgcccgtacgcgtaccggctcggcaccgtcggctggcccttcccgggcacggaggtgcgg
atcgccggcgacggggaggtactgctgcgcgggccgggcgtcatggacggctaccacgag
cggcccgatgccaccgcagaggccctcgaacccgacggctggttccacaccggcgacatc
ggggaactcgacgccgacgggttcctgcggatcacggaccgcaagaaggatctgttcaag
accagccagggcaagtacgtcgcgccgtccgcgatctccgccaccttcaagggcatctgc
ccctatgccagcgagatcgtcgtgtacggcgagagccggccctactgcgtcgccctcgtc
ggtctcgatgccgaggcgatcacagagtgggcggacaagaacggcatggccggcagggag
ttcggtgagatcgcccgggacgagcggacccgcgagctgatcgccggctgcatcgaccgg
ctcaacgaccggctcaaccgctgggagcagatcaagaagttcacggtcctcgaccgggag
ctgtccatcgaggcgggggatctgacgcccagcatgaagctgcgccgcaagctggtggtc
gacaatttcgccgaccggatcgagcagctctacgtctga
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