Rhodococcus sp. 11-3: KZJ41_17370
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Entry
KZJ41_17370 CDS
T10209
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rhou Rhodococcus sp. 11-3
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhou03032
]
KZJ41_17370
03036 Chromosome and associated proteins [BR:
rhou03036
]
KZJ41_17370
03400 DNA repair and recombination proteins [BR:
rhou03400
]
KZJ41_17370
DNA replication proteins [BR:
rhou03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KZJ41_17370
Chromosome and associated proteins [BR:
rhou03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KZJ41_17370
DNA repair and recombination proteins [BR:
rhou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KZJ41_17370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
USC13470
LinkDB
All DBs
Position
complement(3741551..3742285)
Genome browser
AA seq
244 aa
AA seq
DB search
MNKAELIDVLTEKLGSDRRTATAAVEHMVDAIVRAVHSGKSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGSQKLPATGPAVKRGAAAAAKKTAAAKKTA
AKKTAAAKKTAAKAAPAKKATTAAKAPAKTTAAKKTTAAKAPAKTTAAKKTTAAKKTTAA
KAPAKTTAAKKTTAAKKTTAAKAPAKTTAAKKTTAAKKTTAAKAPAKKTTAAKKAPARKA
AAKK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcagagctgatcgatgttctgaccgaaaaactcggttcggacaggcgcact
gcaacggcggccgtggagcacatggtcgacgcgatcgtgcgcgcagtgcactcgggtaag
agcgtcacgatcaccggcttcggcgtcttcgagcagcgccgccgcgcggcgcgggtcgcg
cgcaacccgcgcacgggtgagaccgtgaaggtcaagccgacgtcggtgccggcgttccgc
cccggcgcgcagttcaaggcggtcatcgccggcagccagaagctccccgcgaccggtccg
gccgtcaagcggggcgcggctgccgcggcgaagaagaccgcggccgcgaagaagaccgcg
gccaagaagaccgcggcggcgaagaagactgccgccaaggcagctccggcgaagaaggcg
accacggcggccaaggctccggccaagaccaccgcggcgaagaagaccacggcggccaag
gctccggccaagaccaccgcggccaagaagaccacggcggcgaagaagaccacggcggcc
aaggctccggccaagaccaccgcggccaagaagaccaccgcggcgaagaagaccaccgcg
gccaaggctccggccaagaccaccgcggccaagaagaccaccgcggcgaagaagaccacc
gcggccaaggctccggccaagaagaccaccgcggccaagaaggcgccggcccggaaggct
gcagccaagaagtag
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integrated database retrieval system
