Rhodococcus sp. 11-3: KZJ41_18760
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Entry
KZJ41_18760 CDS
T10209
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rhou Rhodococcus sp. 11-3
Pathway
rhou00020
Citrate cycle (TCA cycle)
rhou00190
Oxidative phosphorylation
rhou00650
Butanoate metabolism
rhou00720
Other carbon fixation pathways
rhou01100
Metabolic pathways
rhou01110
Biosynthesis of secondary metabolites
rhou01120
Microbial metabolism in diverse environments
rhou01200
Carbon metabolism
Module
rhou_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhou_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhou_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
KZJ41_18760 (sdhA)
00650 Butanoate metabolism
KZJ41_18760 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
KZJ41_18760 (sdhA)
00720 Other carbon fixation pathways
KZJ41_18760 (sdhA)
Enzymes [BR:
rhou01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
KZJ41_18760 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
DAO
Thi4
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
USC13710
LinkDB
All DBs
Position
4026895..4028646
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AA seq
583 aa
AA seq
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MQEHRYDVVIVGAGGAGMRAAIEAGPRARTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYALDIALTETPEGPVATGV
IAYELATGEIHVFHAKSIVFATGGSGRMYKTTSNAHTLTGDGMGIIFRKGLPLEDMEFHQ
FHPTGLAGLGILISEAVRGEGGILRNADGERFMERYAPTIKDLAPRDIVARSMVLEVLEG
RGAGPNKDYVYIDVTHLGEDVLEEKLPDITEFARTYLGVDPVTELVPVYPTCHYVMGGIP
TKINGEVLRNNEDEVPGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAAEYANT
HDHVDLPEDPARNVVEWLERILGAGGKERVADIRSELQQSMDNNASVFRTEETLSKALED
IHALKERYKNITVQDKGKRYNSDLLEAVELGFLLEMAEVTVAGALNRKESRGGHAREDYP
TRDDENFLKHTMAYKEGTELISPIRLDYKPVVQTRYEPMERKY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacatcgttatgacgtggtcatcgtcggtgccggcggcgccggcatgcgtgcg
gccatcgaggccggcccccgcgcccgcaccgcagttctgaccaagctctaccccacccgc
agccacaccggcgccgcccagggcggcatgtgcgccgccctcgcgaacgtcgaggaggac
aactgggagtggcacaccttcgacaccgtcaagggtggcgactacctggtcgaccaggac
gcggcggagatcatggccaaggaggccatcgatgcggtgctggacctcgagaagatgggg
cttccgttcaaccgcacgcccgagggcaagatcgaccagcgccggttcggtggccacacc
cgtgaccacggcaaggccccggtgcgtcgcgcctgctacgcggccgaccgcaccggccac
atgatcctgcagacgctctaccagaactgcgtcaagcacgacgtggagttcttcaacgag
ttctacgcgctcgacatcgcgctgacggaaacccccgaaggccccgtcgcgaccggcgtc
atcgcgtacgagctcgccaccggcgagattcacgtcttccatgccaagtcgatcgtgttc
gcgaccggcggctcgggccgcatgtacaagacgacgtccaacgcgcacaccctcaccggt
gacggcatgggcatcatcttccgcaagggcctgccgctcgaggacatggagttccaccag
ttccatccgacgggactcgcgggcctgggcatcctgatctccgaggccgtgcgcggcgag
ggcggcatcctccgcaacgccgacggcgagcgcttcatggagcgctacgcccccaccatc
aaggacctcgcgccccgcgacatcgtcgcccgttcgatggtgctcgaggtgctcgagggc
cgcggcgccggcccgaacaaggactacgtctacatcgacgtgacccacctcggtgaggac
gtcctcgaggagaagctcccggacatcaccgagttcgcccgcacctacctcggcgtcgac
cccgtcaccgagctcgtgccggtgtacccgacctgccactacgtgatgggcggcatcccc
accaagatcaacggtgaggtgctgcgcaacaacgaggacgaggtcccgggcctctacgcc
gccggcgagtgcgcctgcgtctccgtccacggcgccaaccgcctcggcaccaactcgctg
ctcgacatcaacgtgttcggccgccgcgccggcatcgcggccgccgagtacgcgaacacc
cacgaccacgtggacctgccggaggacccggcccgcaacgtcgtggagtggctcgagcgg
atcctgggtgccggtggcaaggagcgcgtggcggacatccgcagcgagctgcagcagtcc
atggacaacaacgcctcggtgttccgcaccgaggagacgctcagcaaggcgctcgaggac
atccacgccctgaaggagcggtacaagaacatcaccgtccaggacaagggcaagcgctac
aacagcgacctgctcgaggccgtcgagctgggcttcctgctcgaaatggccgaggtcacc
gtcgccggtgcgctcaaccggaaggagtcgcgcggcggccatgcccgcgaggactacccg
acgcgcgacgacgagaacttcctcaagcacaccatggcctacaaggaggggacggagctg
atctcccccatccgcctggactacaagccggtggtgcagacccgctacgagccgatggag
cggaagtactga
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