Rhodococcus sp. 11-3: KZJ41_20850
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Entry
KZJ41_20850 CDS
T10209
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
rhou Rhodococcus sp. 11-3
Brite
KEGG Orthology (KO) [BR:
rhou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhou03021
]
KZJ41_20850
Transcription machinery [BR:
rhou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KZJ41_20850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_Crp_2
HTH_3
MarR
HTH_AsnC-type
HTH_24
DUF7343
MarR_2
HTH_23
Sigma70_ECF
HTH_31
HTH_ParB
HTH_IclR
KORA
LacI
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
USC14084
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All DBs
Position
4515219..4516016
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AA seq
265 aa
AA seq
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MTGTGAQRRSGRAADEYADVIPLFEEMVTFDEDDPARGVLRDSLVERCLPLAEHIARRFD
GRGEAFDDLLQVARLGLVNAVDRFDPERGSDFVSFAVPTIMGEVRRHFRDAGWAVRVPRR
MKEMHLALSKATGELSQRLGRAPTAAELAAELGLDPEEVAEGLVAGNAYQAVSVDRPAPA
GDDGVTLADTLGDYDAALAHVENHEALRPLLAALPERERTVVLLRFFGNMTQTQIAERVG
VSQMHVSRLLTKTLAQLREQLGEGF
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
gtgacggggaccggcgcccaacggcgcagcggccgagccgccgacgaatacgccgacgtc
atccccctcttcgaggaaatggtgacgttcgacgaggacgatcccgcgcgcggagtcttg
cgggacagcctggtcgaacgatgcctgcccctcgcggaacacatcgcccgccggttcgac
ggccgcggcgaggcattcgacgacctcctgcaggtcgcccgcctcggcctggtcaacgcc
gtggaccgtttcgaccccgagcggggctcggacttcgtgtccttcgcggttccgaccatc
atgggcgaggtgcgccggcacttccgcgacgccggttgggcggtgcgggtgccgcgccgg
atgaaggagatgcatctggcgctgagcaaggcgaccggggaactgtcacagcgcctgggc
cgcgcccccacggctgccgaactcgccgccgagctgggcctcgatccggaggaggtggcg
gagggcctcgtcgccggcaacgcgtaccaggcggtctctgtcgaccgtccggccccggcc
ggggacgacggcgtcaccctggcggacactctcggcgactacgacgccgcgctcgcgcac
gtggagaaccacgaggcactgcgcccgttgctggctgcgctgccggaacgtgagcgcacg
gtcgtgctgctgcggttcttcgggaacatgacccagacccagatcgccgaacgtgtcggc
gtgtcccagatgcacgtgtcccggctgctgacgaaaaccctcgcccagctgcgcgaacaa
ctgggcgagggtttctag
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