KEGG   Rhodococcus sp. 11-3: KZJ41_27125
Entry
KZJ41_27125       CDS       T10209                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rhou  Rhodococcus sp. 11-3
Pathway
rhou00061  Fatty acid biosynthesis
rhou00071  Fatty acid degradation
rhou01100  Metabolic pathways
rhou01212  Fatty acid metabolism
rhou02024  Quorum sensing
rhou04146  Peroxisome
Module
rhou_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rhou00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    KZJ41_27125
   00071 Fatty acid degradation
    KZJ41_27125
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    KZJ41_27125
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KZJ41_27125
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rhou01004]
    KZJ41_27125
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhou04147]
    KZJ41_27125
Enzymes [BR:rhou01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     KZJ41_27125
Lipid biosynthesis proteins [BR:rhou01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   KZJ41_27125
Exosome [BR:rhou04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   KZJ41_27125
  Exosomal proteins of breast cancer cells
   KZJ41_27125
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_3
Other DBs
NCBI-ProteinID: USC15201
LinkDB
Position
complement(5888653..5890320)
AA seq 555 aa
MTSEKRPWTALYPNGLDPEPAVPFVSLVDVWRARVDANPDGKAIAYFDGVLTARETDELS
NALAVALAARGVQRGDRVGIYLQNIPQYALTLLALWKLGAAALVLNPMYRRAELRRLVDD
AEIVGIVCADTAVAETADTVRDSSVRWIFSTSDLDFQTRDDARVFPSTDRAVAAPDGDLV
ELIEQHRGRRPPHVEITGDDVALLAYTSGTTGPPKGAMNTHANVLAVATTFGSFVGLAAG
DAVFAVAPLFHITGAVINATLALVHDTALVFANRFNAEVALEALVEHGVTFTIGSITVFN
ALYETPGAEARHFASIKTLYSGGAPIPPATVEKFEAKFGKYIHNAYGMTETSSGVIAVPP
GRRAPVDPASGTLAIGVPLPLLDARVVDADGADVEPGKQGELELSGPQVISGYWRNPEAS
AATLPDGRLRTGDGAIIDRHGWVYLVDRLKDQINVSGYKVWPREVEDALYEHPAVHEAAV
VGQPDDYQGESVVAYVSLERDAHATERELVDFVRDRLAAYKRPRRVHIVENLPKTQTGKI
RRSDLRDRTIPTPTA
NT seq 1668 nt   +upstreamnt  +downstreamnt
gtgacgtccgagaagcgcccctggaccgcgctctacccgaacgggctcgatcccgagccg
gcggtgccgttcgtctccctggtggacgtgtggcgcgcccgcgtggatgccaacccggac
ggcaaggccatcgcctacttcgacggtgtgctgaccgcccgcgagaccgacgagctctcc
aacgccctcgccgtcgccctcgccgcccgtggggtccagcgcggcgaccgggtgggcatt
tacctgcagaacatcccccagtacgcgctgaccctgctcgcgttgtggaagctcggggcc
gcggcgctcgtgctcaaccccatgtaccggcgggccgaactgcgccgcctcgtcgacgac
gccgagatcgtcggcatcgtgtgcgccgacaccgccgtcgcggagaccgcggacaccgtc
cgcgacagctccgtgcggtggatcttcagcaccagtgacctggacttccagacccgcgac
gacgcccgggtcttcccgtcgacggaccgcgccgtggccgcgcccgacggtgacctcgtc
gagctgatcgaacaacaccggggccggcggccgccccacgtcgagatcaccggcgacgac
gtcgcgttgctcgcctacacctcgggcaccaccggtccgccgaagggtgcgatgaacaca
cacgccaacgtgctggccgtggccaccaccttcggttccttcgtcggcctggccgccggc
gacgcggtgttcgccgtcgccccgctgttccacatcaccggcgccgtcatcaacgccacg
ctggcgctggtgcacgacaccgccctggtcttcgcgaaccgcttcaacgccgaggtcgcg
ctcgaggccctcgtcgagcacggggtcacgttcacgatcggctcgatcacggtgttcaac
gccctgtacgaaacccccggcgccgaggcccgccacttcgcctcgatcaagaccctctac
tccggcggcgcgccgatcccgcccgcgaccgtggagaagttcgaagcgaagttcggcaag
tacatccacaacgcctacggcatgaccgagacctcctccggcgtgatcgcggtaccgccc
gggcggcgggcacccgtcgaccccgccagcggcaccctcgcgatcggcgtcccgctgccc
ctgctcgacgcgcgtgtcgtcgatgcggacggcgccgacgtcgaacccggcaagcagggt
gaactggaactgtccggcccgcaggtgatctccgggtactggcgcaaccccgaggcgtcc
gccgccaccctgccggacgggcggctgcgcaccggcgacggtgcgatcatcgaccggcac
ggctgggtctacctggtggaccgcctgaaggaccagatcaacgtctccggatacaaggtg
tggccccgcgaggtcgaggacgccctgtacgagcatcccgccgtccacgaggccgccgtc
gtcggccagcccgacgactaccagggcgaatccgtggtggcgtacgtgtcgctcgaacgc
gacgcccacgccaccgagcgcgagctcgtggacttcgtccgcgaccgcctcgccgcctac
aagcggccccgccgggtccacatcgtcgagaacctccccaagacccagaccggcaagatc
cggcgcagcgacctgcgcgaccgcacgatccccaccccgaccgcctga

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