Rhodovulum sp. HP10: ACK8CO_07060
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Entry
ACK8CO_07060 CDS
T11157
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rhov Rhodovulum sp. HP10
Pathway
rhov03030
DNA replication
rhov03430
Mismatch repair
rhov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACK8CO_07060
03430 Mismatch repair
ACK8CO_07060
03440 Homologous recombination
ACK8CO_07060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhov03032
]
ACK8CO_07060
03400 DNA repair and recombination proteins [BR:
rhov03400
]
ACK8CO_07060
Enzymes [BR:
rhov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACK8CO_07060
DNA replication proteins [BR:
rhov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACK8CO_07060
DNA repair and recombination proteins [BR:
rhov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACK8CO_07060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_30
AAA_5
RuvB_N
AAA_22
AAA_16
AAA_19
AAA_14
TIP49
AAA_18
DUF815
AAA_assoc_2
Glyco_tranf_2_5
Rad17
AAA_24
Motif
Other DBs
NCBI-ProteinID:
XOE43111
LinkDB
All DBs
Position
complement(1536613..1538373)
Genome browser
AA seq
586 aa
AA seq
DB search
MAETEGTAYQVLARKYRPATFADLIGQDAMVRTLKNAFAADRIAQAFIMTGIRGTGKTTT
ARIIAKGMNCIGPDGQGGPTTEPCGECEHCRAIAEGRHVDVMEMDAASRTGVNDIREIID
SVAYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSR
CQRFDLRRIEPEVMIGHLRKIAGLENAPITDEALGLITRAAEGSVRDAMSLLDQAISHGA
GETGVDQVRAMLGLADRGRVLDLFDMIMAGDAAGALGELAGQYADGADPLAVLRDLAEIS
HWLSVIKITPEAADDPTVGPDERARGRTMAERLSMRVLTRMWQMLLKALEEVSMAPNAMM
AAEMAVIRLTHVSTLPSPEDLVRKLQENPPTGPAPSGPAPSGGGDNGGGGMQGQVRSGPV
HAAPSGGGAVTALARAPEQTLAHYPSFEAVVDLIRANRDMVLLVEVEAGVRLVSYSPGRI
EFEPGPSAPSDLAQRLGQRLQSWTGARWAVSVVARGGAPSIDEVRNAAEAARRAEAAEHP
LVRAVFAAFPRAEIIDIKPPEVLAAEAAAEALPEVEEEWDPFEDDD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggccgagacagagggcaccgcctatcaggtgctggcgcgaaaataccgccccgccaca
ttcgccgatctgatcggccaggatgcgatggtgcgcaccctcaagaacgcctttgccgcc
gaccggatcgcgcaggccttcatcatgaccggcatccggggcaccggcaagacgacgacg
gcccggatcatcgccaagggcatgaactgcatcggcccggacgggcagggcggcccgacc
accgagccctgcggcgaatgcgagcattgccgggccatcgccgaggggcgccatgtcgac
gtgatggagatggacgcggcctcgcgcaccggcgtgaacgacatccgcgagatcatcgac
agcgtggcctaccgggcggcctcggcgcgctacaagatctacatcatcgacgaggttcac
atgctgtcgaccagcgcgttcaacgcgctgctgaagacgctcgaggaaccccccgcccat
gtgaagttcatcttcgccacgaccgagatccgcaaggtgccggtgacggtgctgtcgcgc
tgccagcgcttcgacctgcgccggatcgagcccgaggtgatgatcggccatctgcgcaag
atcgcggggctcgagaacgcgccgatcaccgacgaggcgctggggctgatcacccgcgcc
gccgagggttcggtccgcgacgcgatgagcctgctcgatcaggcgatctctcacggcgcg
ggcgagaccggggtcgatcaggtccgcgccatgctggggctcgcggaccggggacgggtg
ctcgatctgttcgacatgatcatggcgggcgatgcggccggcgcgctgggcgaactggcc
gggcaatatgccgatggtgccgatccgctggcggtgctgcgcgatctggccgagatcagc
cactggctcagcgtcatcaagatcacccccgaggcggccgacgatccgaccgtcggcccc
gatgagcgtgcccgcggccggaccatggccgagcggctgtcgatgcgggttctgacgcgg
atgtggcagatgctgctgaaggcgctggaagaggtctcgatggcgcccaacgcgatgatg
gcggccgaaatggcggtgatccggctgacccatgtctcgaccctgccaagccccgaggat
ctggtccggaagctgcaggagaaccctcccaccggtccggccccctcgggccccgcgccc
tcgggcggcggtgacaatggcggcggcgggatgcagggtcaggtccggagcggcccggtc
catgccgcgccctcgggcggcggtgccgtcaccgcactggcccgcgcgcccgagcagacg
cttgcgcattacccgagcttcgaggcggtggtcgatctgatccgcgccaatcgcgacatg
gtgcttctggtcgaggtcgaggcgggggtgcggctggtcagctattcgcccggccggatc
gagttcgaacccgggccttctgcaccgtccgatctggcgcagcggctggggcagcggctg
cagagctggaccggcgcgcgctgggcggtttcggtcgtggccaggggcggcgcgcccagc
atcgacgaggtccgcaacgcggccgaggccgcgcgtcgcgccgaggccgccgagcatcct
ctggtccgcgccgtttttgccgcctttcccagggccgaaatcatcgacataaagccgccc
gaggtcctggcggccgaggcggcggccgaggccctgcccgaggtcgaagaggaatgggac
ccgttcgaggacgacgactga
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