Rhodovulum sp. HP10: ACK8CO_10100
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Entry
ACK8CO_10100 CDS
T11157
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rhov Rhodovulum sp. HP10
Pathway
rhov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACK8CO_10100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhov03019
]
ACK8CO_10100
03009 Ribosome biogenesis [BR:
rhov03009
]
ACK8CO_10100
Enzymes [BR:
rhov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACK8CO_10100
Messenger RNA biogenesis [BR:
rhov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACK8CO_10100
Ribosome biogenesis [BR:
rhov03009
]
Prokaryotic type
rRNA helicases
ACK8CO_10100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
XOE40075
LinkDB
All DBs
Position
2143315..2145624
Genome browser
AA seq
769 aa
AA seq
DB search
MIPSLSVALAERGFDTLTDVQKAVTAPELAGADLLVSAQTGSGKTVGFGLAIAPTLMGEE
DRMGPPAAPLALVIAPTRELALQVQRELIWLYARAGGKVVSCVGGMDARDERRALDRGAH
IVVGTPGRLRDHITRGALDLSDIRAVVLDEADEMLDLGFREDLEFMLGAAPAGRRTLLFS
ATVPPAIAELAKLYQRDAVRVTTLSRGSQHADIAYKAVQVTAADAEHAIINLLRFHDAPT
AIVFANTRAAVSRLAARFANRGLSAVSLSGELSQDERSHALQAMRDGRARVCVATDVAAR
GIDLPNLDLVIHADLPSNTEALLHRSGRTGRAGRKGISALIVPDKLAKKAGRLLKWAKIE
AEWILAPTPEEILALDETRLLADPIWEAEPTEAEAAFAARLLAERSPETIAAACLRLYRA
GLSAPEELNAPAAPGARPERPPFGPSVWFELSVGRDRRAEPRWLLPLVCRAGNLERSQIG
RIQLQARTSLVEIAEAAVPGFVARIGPDGLLEDDITAKRFDGPVEDTRGSRPKSDRPKSD
RPKSDRPRSERPRPEVRSERAPCPQPAESAVPEASAPRPEAAGAPRVKPDFEARPTPRPE
RREDRPAKADAPKPKAPRREADAAPVERPRKPRHDAERSAPRSEASGPRAKEGRKDGWKD
ARKDERKDNRKDSRKDGRKDGWKDGPARGPKTGPKTGPKGASRDWPKDKRPAAGDTAPAE
RRRPDASDPSKRVERPGAPKGKGARPAGGAKRGAPKPGRGGNVPPRRPR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgtctctttccgtagccctcgccgaacgcgggttcgacacgctgaccgacgtg
cagaaggccgtcaccgcccccgagcttgccggggccgatctcctggtctcggcccagacc
ggctcgggcaagacggtgggcttcggccttgccatcgcgccgacgctgatgggcgaggag
gaccggatggggccgcccgcggcaccgctggcccttgtcatcgcgccgacccgcgaactg
gccctgcaggtccagcgagaactgatctggctttatgcccgggcgggagggaaggtcgtg
tcctgcgtgggcggcatggatgcccgcgacgagcgccgggcgctcgaccggggcgcgcat
atcgtcgtcggcacgcccgggcggctgcgcgaccatatcacccgcggcgcgctcgatctg
tccgacatccgcgcggtggtgctggacgaggccgacgagatgctcgatctcggcttccgc
gaggatctcgaattcatgctgggcgcggcgccggccgggcggcgcacgctgctgttctcg
gcgacggtgccgcccgcgatcgccgagcttgccaagctttaccagcgcgacgcggtccgg
gtgacgacgctgtcgcggggcagccagcatgccgatatcgcctacaaggcggtgcaggtg
acggcggccgatgccgaacatgccatcatcaacctgttgcgcttccacgatgcgcccacc
gccatcgtctttgccaatacccgggccgcggtcagccgtctggcggcgcgctttgccaac
cggggcctgtcggcggtgagcctctcgggcgagctcagccaggacgagcgcagccatgcg
ctccaggcgatgcgcgacggccgggcgcgggtctgcgtggcgaccgatgtggccgcgcgc
ggcatcgacctgcccaatctcgatctggtgatccatgccgatctgcccagcaataccgag
gcgctgctgcaccgttcgggccgcaccggccgggccgggcgcaaggggatctcggcactg
atcgtgcccgacaagctggccaagaaggcggggcggctgttgaaatgggccaagatcgag
gccgaatggatcctggcgccgacgcccgaggaaatcctcgcgctggacgagacccgtctg
ctggccgatccgatctgggaggccgaaccgaccgaggccgaggcagcctttgccgcccgt
cttctggccgagcgcagccccgagacgatcgcggccgcctgcctgaggctctaccgcgcc
gggctttccgcgcccgaggagctgaacgcccccgccgcgcccggtgcgcgccccgagcgt
ccgcctttcgggccctcggtctggttcgagctgtcggtcgggcgcgaccgccgggccgag
ccgcgctggctgttgccgctggtctgccgggccggaaatctcgaacggtcgcagatcggc
cgcattcagctccaggccaggacctcgctggtcgagatcgccgaggccgcggtgccgggt
tttgtcgcgcggatcggtccggacgggctgctcgaggacgatatcaccgccaaacgcttc
gacggcccggtcgaggatacccgcgggtcccgcccgaaatcggatcgtccgaaatccgac
cgcccgaaatctgaccgtccgcgttccgagcggccccggccggaagtccggtccgagcgc
gcgccgtgcccgcagcctgccgaatcagccgtgcccgaagcttcggcgccccgccccgag
gctgccggggcgccccgggtcaaacccgatttcgaggcccggccgacgccccgcccagag
cggcgtgaggaccgtcccgccaaagcggatgcgccgaagcccaaggcgccccggcgcgaa
gccgatgccgcaccggtcgagcggccgcgcaagccgcgccatgacgccgaacgttccgcc
ccacgcagcgaggccagcggcccgcgtgcgaaagaggggcggaaggacggctggaaggat
gcccgcaaggacgagcggaaggataatcgcaaggacagccgcaaggacggacggaaagac
ggctggaaggacgggcccgcgcgcggcccgaaaaccggtccgaaaaccggcccgaaaggc
gcctcgagggactggccgaaggacaagcgtcctgcggcgggcgatacggctccggccgag
cggcgccggcccgatgcctccgacccctcgaagcgggtcgagcgtccgggcgcgccgaag
ggcaagggggcgaggcccgctggcggggccaagcgcggtgctccgaagcccggtcgcggc
ggcaacgtgccgccccggcgtccgcgctga
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