Rhodococcus sp. WB1: A4U64_05820
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Entry
A4U64_05820 CDS
T10270
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rhow Rhodococcus sp. WB1
Pathway
rhow03020
RNA polymerase
Brite
Enzymes [BR:
rhow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4U64_05820
Transcription machinery [BR:
rhow03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4U64_05820
DNA repair and recombination proteins [BR:
rhow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4U64_05820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ANZ24265
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All DBs
Position
1269963..1273934
Genome browser
AA seq
1323 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDDELRHNELSTLEAEMEVEKKSVADQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVKDGGEREMRQLRDRAQRELDRLEEIWNTFTKLKPKDLIVDELL
YRELQDRYGEYFTGAMGAESIQKLIENFDIDAEAESLRETIRSGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVINEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLSSNNILSPASGRPLAMPRLDMVTGLFHLTRLVEDAPGAYR
PATDDEPEQGVYSSPAEAIMAVDRGVLSVQAPIKVRLTRQRPPKDVEAELFPDGWNYGDG
WTVQTTLGRVLFNELLPVNYGFVNDVMPKKRQAAIINDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTVSMADVLVPPEKKEILERYEASADQLERKFARGALSKEERRDSLVKLWQEA
TEEVGQAMEAHYPDDNPIPTIVKSGAAGNMTQIRSLAGMKGLVTNPKGEFIPRPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCGTPRGIEMVI
AEPERDGAGNETGRLVRDAHIETSTYARTLATDAVDADGNVVVTRGSDLGDPAIEALLAA
GIRKVKVRSVLTCDTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTF
HQGGVGEDITGGLPRVQELFEARVPKGKAPIADVSGRVRLEDDDRFYKITIVPDDGGEEV
VYDKLSKRQRLHVIRKANGTEGILADGDHVEVGQQLLEGAADPHEVLRVMGPRQVQVHLV
NEVQEVYRSQGVSIHDKHIEVIVRQMLRRVTIIDSGSTEFLPGSLVERSEFEASNRRVVA
EGGEPAAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLIGLKENVIIG
KLIPAGTGINRYRNIQVQPTEEARAAAYAIPSYEDQYYSPEGFGQNTGAAVPLDDYGYSS
DYR
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgaactccgcatcggcctggccactgcggaggacatc
cgcaactggtcgtacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
cccgagaaggacggcctcttctgcgagaagatcttcggccccacccgggactgggagtgc
tactgcggcaagtacaagcgtgtccgcttcaagggcatcatctgtgagcgctgcggcgtc
gaggtcactcgcgccaaggtgcgtcgtgagcgcatgggccacatcgagctcgccgcgccg
gtcacgcacatctggtacttcaagggtgtgccgagccgcctcggctacctgctcgacctg
gcgccgaaggatctcgagaagatcatctacttcgccgcgtacgtcatcacggcggtggac
gacgagctgcgccacaacgagctctcgaccctcgaggccgagatggaggtcgagaagaag
tccgtcgccgatcagcgcgacgccgacctcgaggcccgcgcgcagaagctcgaggccgac
ctggccgagctcgaggcggagggtgccaagtccgacgtccgccgcaaggtcaaggacggc
ggcgagcgcgagatgcgtcagctgcgcgaccgcgcccagcgtgagctggaccggctcgag
gagatctggaacaccttcaccaagctcaagccgaaggacctgatcgtcgacgagctgctc
taccgcgagctgcaggaccgctacggcgagtacttcaccggcgcgatgggtgccgagtcg
atccagaagctcatcgagaacttcgacatcgacgccgaggccgagtcgctgcgcgagacc
atccgcagcggcaagggccagaagaagctgcgcgccctgaagcgactgaaggtcgtcgcg
gcgttccagcagtccggtaactcgcccatgggcatggttctcgatgcggtgccggtgatc
ccgccggagctgcgtccgatggtgcagctcgacggtggccgcttcgcgacctccgacctg
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgatcgacctc
ggcgcccccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtggacgcg
ttgttcgacaacggccgtcgtggccggccggtcaccggcccgggcaaccgtccgctgaag
tcgctgtccgacctcctcaagggcaagcagggccggttccgtcagaacctgctcggcaag
cgcgtcgactactccggccgttcggtcatcgtcgtcggcccgcagctcaagctgcaccag
tgcggtctgccgaagctgatggcgctcgagctgttcaagccgttcgtgatgaagcgcctg
gtcgacctgaaccacgcgcagaacatcaagtccgcgaagcgcatggtcgagcggcagcgc
ccgcaggtgtgggacgtcctcgaagaggtcatcaacgagcaccccgtgctgctcaaccgt
gctcccacgctgcaccgcctcggtatccaggcgttcgagccgcagctcgtcgagggcaag
gccatccagctgcacccgctcgtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtccgcggaggcgcaggccgaggcccgcgtgctgatgctg
tcgtcgaacaacatcctgtcgccggcgtcgggtcgtccgctcgccatgccgcgtctggac
atggtgaccggtctgttccacctgacccgcctggtcgaggacgcgccgggcgcgtaccgg
ccggccaccgacgacgagccggagcagggcgtgtactcgtccccggccgaggccatcatg
gccgtcgaccgcggcgtgctctcggtgcaggccccgatcaaggtgcgcctgacgcggcag
cgcccgccgaaggacgtcgaggccgagctgttccccgacggctggaactacggtgacggc
tggaccgtgcagaccacgctcggtcgcgtgctgttcaacgagctgctgccggtgaactac
ggcttcgtcaacgacgtcatgccgaagaagcgtcaggccgcgatcatcaacgatctggcc
gagcgttacccgatgatcgtcgtcgcgcagaccgtcgacaagctcaaggacgccggcttc
tactgggccactcgttcgggtgtcaccgtgtcgatggccgacgtgctggtgccgccggag
aagaaggagatcctcgagcgctacgaagcgtccgcggatcagctcgagcgcaagttcgct
cgtggtgccctctcgaaggaggagcggcgcgactcgctcgtcaagctgtggcaggaggcg
accgaagaggtcggtcaggccatggaggcgcactacccggacgacaacccgatcccgacg
atcgtgaagtccggcgccgcgggcaacatgacccagatccgctcgctcgcgggcatgaag
ggtctggtgacgaacccgaagggtgagttcatcccgcgcccgatcaagtcctcgttccgt
gagggcctgaccgtgctcgagtacttcatcaacacccacggtgcccgtaagggtctggcc
gacaccgcgctccgtaccgccgactcgggttacctgacccgtcgtctggtcgacgtgtcg
caggacgtcatcgtccgcgagaccgactgcggcaccccgcgcggtatcgagatggtcatc
gccgagcccgagcgcgacggcgcgggcaacgagaccggccgcctggtgcgcgacgcccac
atcgagaccagcacgtacgcccgtacgctggccaccgatgcggtcgacgcggacggcaac
gtcgtcgtcacccggggcagcgacctcggcgacccggcgatcgaggccctgctggccgcc
ggcatccggaaggtcaaggtccgctccgtgctgacctgcgacaccggcaccggcgtgtgc
gccacctgctacggccgctcgatggcgaccggcaagctcgtcgacatcggcgaggccgtc
ggtatcgtcgccgcgcagtcgatcggtgagcccggtacgcagctgacgatgcgtacgttc
caccagggtggcgtcggtgaggacatcaccggcggtctgccgcgagtgcaggagctcttc
gaggcccgcgtcccgaagggcaaggcgcccatcgccgacgtctccggccgcgtgcgcctc
gaggacgacgaccgcttctacaagatcaccatcgtcccggacgacggcggcgaggaggtc
gtgtacgacaagctgtcgaagcgtcagcgtctgcacgtgatccgcaaggcgaacggcacc
gagggcatcctcgccgacggcgaccacgtggaggtcggtcagcagctcctcgagggtgct
gccgatccgcacgaggtgctgcgtgtcatgggtccgcgtcaggtgcaggtccacctcgtg
aacgaggttcaggaggtgtaccgcagccagggtgtgtcgatccacgacaagcacatcgag
gtcatcgtgcgccagatgctgcgtcgcgtcacgatcatcgactcgggttcgacggagttc
ctgcccggttcgctggtcgagcgcagcgagttcgaggcctccaaccggcgggtcgtcgcc
gagggcggcgagccggctgccggtcgtcccgtgctcatgggtatcaccaaggcgtcgctg
gccaccgattcgtggctgtcggcggcgtcgttccaggagaccactcgcgtgctgaccgac
gcggcgatcaactgccgctcggacaagctgatcggtctgaaggagaacgtgatcatcggc
aagctgatcccggccggcaccggcatcaaccggtaccggaacatccaggtgcagccgacc
gaggaggcccgcgcggccgcgtacgctatcccgtcgtacgaggatcagtactactcgccg
gagggcttcggccagaacaccggcgctgcggttccgctcgacgattacggttactccagc
gactaccggtag
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