KEGG   Rhodococcus sp. WB1: A4U64_10385
Entry
A4U64_10385       CDS       T10270                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
rhow  Rhodococcus sp. WB1
Pathway
rhow03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rhow00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    A4U64_10385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhow03400]
    A4U64_10385
DNA repair and recombination proteins [BR:rhow03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A4U64_10385
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      A4U64_10385
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran AAA_29 SMC_N AAA_21 AAA_16 RsgA_GTPase AAA_25 NACHT DnaJ_CXXCXGXG ScfRs Viral_helicase1 NTPase_1 ExoX-like_C cobW
Other DBs
NCBI-ProteinID: ANZ25041
LinkDB
Position
2338949..2341882
AA seq 977 aa
MADRLIVRGAREHNLRGIDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLYARAGTAH
CPQCGEQIARQTPQQIVDQVLDMEQGTRFQVLAPVVRTRKGEFVDLFEQLTVQGYARVRV
DGVVYPLTDPPKLKKQEKHDIEVVVDRLAVKASAKQRLTDSIETALRLAEGIVVLDFVDR
DENAADRERRFSETLACPNGHPLSIDELEPRSFSFNSPYGACPECTGLGIRKEVDPELVV
PDPELSLEDGAIAPWSMGQTSEYFTRLLSGLADIMGFEMSTPWNKLPAKARKAILEGSPE
QVHVRYKNRYGRTRSYYAEFEGVMPFLHRRLEQTESEQMKERYDGYMREIPCPTCEGARL
RPEILAVTIAAGEHGHKSIAEVSDLSIAECAEFLNALTLGAREEAIAGQVLKEIQARLGF
LLDVGLEYLTLSRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIE
TLTRLRDLGNTLIVVEHDEDTIRASDWVVDIGPYAGEHGGRVVHTGPYKELLECTESLTG
AYLSGRQRIEVPEQRRPVDRKRQVTVVGARENNLRGIDVAFPLGVLTSITGVSGSGKSTL
VNDILATVMANKLNGARQVPGRHTRVNGLDQLDKLVQVDQSPIGRTPRSNPATYTGVFDK
IRTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCHGAR
YNRETLEVHYKGKTIAEVLDMPIEEAAEFFEPVTSIHRYLRTLVDVGLGYVRLGQPAPTL
SGGEAQRVKLAAELQKRSTGRTVYVLDEPTTGLHFEDIRKLLGVINGLVDKGNTVIVIEH
NLDVIKTADWIIDMGPEGGSGGGTVVAQGTPEDVATVEGSYTGTFLREALAESVAQEPAP
ARKPARKRAPRKVAAAS
NT seq 2934 nt   +upstreamnt  +downstreamnt
gtggcggatcgcctgatcgtgcgtggcgcgcgggagcacaacctgcgggggatcgacctg
gacctgccgcgtgacagcctgatcgtcttcaccggcctgtccgggtcgggcaagtcgagc
ctggcgttcgacacgatcttcgccgaggggcagcgccgttacgtcgagtcgctgtccgcc
tacgcgcgccagttcctcggccagatggacaaacccgacgtcgacttcatcgagggcctg
tcgccggcggtgtccatcgaccagaagtccaccaaccggaacccgcgctcgacggtgggc
accatcaccgaggtctacgactatctgcgcctgctctacgcccgcgcaggcacggcgcac
tgcccgcagtgcggggagcagatcgcccggcagacgccgcagcagatcgtcgaccaggtc
ctcgacatggagcagggcacccggttccaggtgctcgccccggtcgtgcgcacccgcaag
ggggaattcgtcgacctgttcgagcagctgaccgtgcaggggtacgcccgcgtgcgggtc
gacggagtggtctatcccctcactgatccgccgaagctgaagaagcaggagaaacacgac
atcgaggtggtcgtcgaccgcctcgcggtcaaggcgagcgccaagcagcggctcaccgat
tcgatcgagaccgcgctgcgcctggcggagggcatcgtcgtcctcgacttcgtggaccgg
gacgagaacgccgccgaccgcgagcgtcgcttctccgagacgctcgcctgcccgaacggg
caccccctgtccatcgacgaactcgaaccccggtccttctcgttcaactccccgtacggc
gcctgccccgaatgcaccggcctcggcatccgcaaggaggtcgacccggagctcgtcgtg
ccggacccggaactcagcctcgaggacggtgcgatcgcgccctggtcgatggggcagacc
tccgagtacttcacccggctgctgtccgggctcgccgacatcatgggcttcgagatgtcc
accccgtggaacaagctgccggccaaggcccgcaaggccatcctcgagggcagcccggaa
caggtccacgtccgctacaagaaccggtacggccggacacggtcgtactacgccgagttc
gagggcgtgatgccgttcctgcaccgccggctcgaacagaccgagtccgagcagatgaag
gaacgctacgacgggtacatgcgggagatcccgtgccccacgtgcgagggcgcgcggctg
cgtccggagatcctcgcggtgacgatcgccgcgggcgagcacggacacaagtccatcgcc
gaggtctccgacctgtccatcgccgagtgcgccgagttcctgaacgccctgaccctcggg
gcgcgggaggaggccatcgcagggcaggtgctcaaggagatccaggcgcgtctcgggttc
ctgctcgacgtgggactcgaatacctcaccctgtcccgcgcggccggcaccctgtccggc
ggggaggcacagcgcatccgtctcgccacccagatcggctcgggcctggtcggtgtcctg
tacgtcctggacgagccgtccatcggcctgcaccagcgcgacaaccgccggctcatcgaa
accctcacgcggctgcgtgatctcggcaacaccctgatcgtcgtcgagcacgacgaggac
accatccgcgcgtcggactgggtcgtcgacatcgggccgtacgccggcgagcacggcggt
cgcgtcgtgcacaccggcccctacaaggaactgctcgagtgcaccgagtcgctcaccggc
gcgtacctgtccggacgtcagcggatcgaggtgccggagcagcgccggccggtggaccgc
aagcgtcaggtcaccgtcgtcggcgcccgcgagaacaacctgcgcggcatcgacgtggcc
ttcccgctcggcgtgctcacctccatcaccggtgtctccggatccggcaagtcgacccta
gtcaacgacattctcgcgacggtcatggccaacaagctcaacggcgcgcggcaggtgccc
ggccggcacacccgcgtcaacgggctcgaccagctcgacaagctcgtgcaggtggaccag
tcgccgatcggccgtaccccgcggtcgaatccggccacctacacgggcgtgttcgacaag
atccgcaccctgttcgccgcgaccaccgaggcgaaggtgcgcggctatcagccgggccgg
ttctcgttcaacgtcaagggcggccgatgcgaggcctgctcgggtgacggcacgctcaag
atcgagatgaacttcctgcccgacgtgtacgtgccgtgcgaggtgtgccacggggcccgc
tacaaccgcgagaccctcgaggtgcactacaagggcaagaccatcgccgaggtgctggac
atgcccatcgaggaggccgccgagttcttcgagccggtcacctcgatccaccgctacctg
cgcacccttgtcgacgtcggcctcggatacgtgcgcctgggccagccggccccgaccctt
tcggggggcgaggcgcagcgcgtcaagctcgccgcggagctgcagaagcggtcgacgggc
cgcaccgtgtacgtgctggacgagccgaccaccggtctgcacttcgaggacatccgcaag
ctgctcggcgtgatcaacgggctcgtcgacaagggcaacacggtgatcgtgatcgaacac
aatctcgacgtgatcaagacggcggactggatcatcgacatgggccccgaagggggctcc
ggcggcggcaccgtcgtcgcgcagggcacgcccgaggacgtcgcgacggtcgagggcagc
tacaccggcacgttcctgcgcgaggcgctcgccgagtccgtcgcccaggagcccgcgccc
gcccgcaagccggcgcgcaagcgcgcgccgcggaaggtggcggccgcgagctga

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