Rhodococcus sp. WB1: A4U64_12670
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Entry
A4U64_12670 CDS
T10270
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
rhow Rhodococcus sp. WB1
Brite
Enzymes [BR:
rhow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
A4U64_12670
Messenger RNA biogenesis [BR:
rhow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A4U64_12670
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ANZ25432
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Position
2870578..2874498
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AA seq
1306 aa
AA seq
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MSTSPETPRSPAPPGATRRDLKAGLTEVSLRDEHRIRRRLDRARGPEALAKIADEIEQAR
LRLAARAAGVPTVTYPDNLPVSQRRDDIAAAIRDHQVVIVAGETGSGKTTQIPKICLELG
RGVRGLIGHTQPRRIAARAVAERIAEELDSELGDTVGYTVRFTDRVSDSTLIKLMTDGIL
LAEIQRDRLLRRYDTLVIDEAHERSLNIDFILGYLKELLPRRPDLKVIITSATIDPERFA
NHFAAADGTPAPIVEVSGRTYPVEIRYRPLTVEVGDALVDRDPVDAVCEAVEELCAEGDG
DILVFLSGEREIRDTADALRDRKLRGTEILPLYARLSAAEQHRVFTPHTGRRVVLSTNVA
ETSLTVPGIRYVVDPGTARISRYSVRTKVQRLPIEEISQASARQRSGRCGRVADGICIRL
YSEEDFEARPEFTEPEILRTNLASVVLQMTALGLGDLASFPFVEAPDPRAVRDGIALLEE
LGALEPPSKDEPPKLTGTGRELALLPVDPRMARMIVEGHRNGCLREVLIIVAALSIQDVR
ERPAEFQQAADEKHARFAVEGSDFLAYLKLWDYLKEQRKELSSSRFRKMCRDEFLHWLRI
REWQDLQGQLRQITLNLGWETRHQDVGHDAIHQSLLAGLLSHVGVREGEKRDFLGARGTR
FAIFPGSSLSRKPPRWVMAAELVETSRLWARVTARIEPEWAEKLAPHLVKRTYSEPHWST
RREAAMAYERVTLYGIPLVAQRPVQYGPIDREASRELFIRHALVQGEWRTRHRFFHANRE
LLKDVEALEHRARRRDILVDDETLFEFYDQRVGPEVVSARHFDAWWKKERQKNPDLLTFT
PETVVNQEAPTVLGGDYPDAWRQGDLQFPLTYQFEPGTEEDGVTVRIPVALLAGVRPVGF
DWSVPGMRVELVTALIKTLPKHLRRQVVPAPDFAAAALASVQPRSEPLVNAMARELSRLG
AARIEPSDFDPTALPDHLRMTFAAVDERGAVLARSKSLTALRRQLANRVEAEVSRAASST
ERAPALVWTAETLGTLEPTVTRTVAGQQVTGYPTLVAEDGGVAVRVLSTPHAQQAAMRTG
LRALLLEAVPMQARAATSGLSNGERLALGRNPDGSFEDLLEDCRACAVDELIARHGKPVR
TPDEFTALAKVVRAQLPGRVAALLKLVVPALARAHEVEVLLERVRGEAAEDVREQLTSLL
FRGFVAELGSARLADLPRYLAAAAHRLESLPASALRDRQGMDVLDRVYAEYDRLLARLPE
ERATAADVVEVSWMIEELRVSLFAQHLGTRGPISETRILKAVAAIR
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgtccacctcacccgagaccccgcgctcccccgccccgcccggggcgacccgtcgcgac
ctgaaggcaggcctcaccgaggtatcgctgcgcgatgagcaccgcatccgccggcggctc
gaccgcgcccgcggacccgaggcgctggcgaagatcgccgacgagatcgagcaggcgcgg
ttgcggctcgcggcgcgggcggccggcgtgccgacggtcacctaccccgacaacctcccg
gtctcgcagcgcagggacgacatcgccgccgcgatccgcgaccaccaggtggtgatcgtc
gccggcgagaccggctccggcaagaccacgcagatcccgaagatctgcctcgaactcggc
cgcggcgtccgcggcctgatcgggcacacgcagccgcgccgcatcgcggcccgggcggtc
gccgagcgcatcgccgaggaactcgactccgaactcggcgacaccgtcggctacaccgtc
cggttcaccgaccgggtgtcggactcgacgctgatcaagctgatgaccgacggcatcctc
ctcgccgagatccagcgcgatcggctgctgcgccgttacgacaccctcgtcatcgacgag
gcccacgaacgcagcctcaacatcgacttcatcctcggctacctcaaggaactgctgccc
cggcggccggacctgaaggtgatcatcacctcggcgaccatcgacccggaacggttcgcg
aaccacttcgcagcggccgacggcacgcccgcgcccatcgtcgaggtctccggccgcacc
tatccggtcgagatccggtaccgtcccctgacggtcgaggtgggcgacgcgctcgtcgac
cgcgacccggtggatgccgtctgtgaggcggtcgaggaactctgcgccgagggagacggg
gacatcctcgtgttcctctccggtgaacgcgagatccgcgacaccgccgacgcgctgcgc
gaccgcaagctacggggcaccgagatcctgccgctgtacgcgcggctgtccgccgccgag
cagcaccgggtgttcaccccacacaccggccggcgagtggtgctgtccaccaacgtcgcc
gaaacctcgctcaccgtgcccggtatccgctacgtcgtcgaccccggcaccgcgcggatc
tcccgctactcggtgcgcaccaaggtccagcgactgcccatcgaggagatctcgcaggcc
tccgcccggcagcggtccggccgctgcggccgcgtcgccgacggcatctgtatccggctg
tactccgaggaggacttcgaggcccgccccgagttcaccgaaccggagatcctgcgcacc
aacctcgcctcggtcgtgctgcagatgacggcgctcgggctcggcgacctcgcctcgttc
ccattcgtcgaggcccccgacccgcgggccgtccgcgacggtatcgcgctgctcgaggaa
ctcggtgcgctcgaaccgccgtcgaaggacgaaccaccgaaactgaccggcaccggacgc
gaactcgcgctgttgccggtcgatccgcgcatggcgcggatgatcgtggagggtcaccgc
aacgggtgcctgcgcgaggtcctgatcatcgttgcggcgctgtcgatccaggacgtgcgc
gaacggccggccgagttccagcaggcggcggacgagaagcacgcccggttcgccgtcgag
ggctcggacttccttgcgtacctgaagctgtgggactacctgaaggagcagcggaaggaa
ctgtcgtccagccggttccgcaagatgtgccgcgacgagttcctgcactggctgcggatc
cgggaatggcaggatctgcagggccagctgcgccagatcaccctcaacctcgggtgggag
acgcggcatcaggacgtcggccacgacgcgatccaccagtcgctgctggccgggctgctc
tcgcacgtcggcgtgcgtgagggcgagaagcgggacttcctcggcgcgcgcgggacccgg
ttcgcgatcttccccggctcgtcgctgtccaggaagccgccgcgctgggtgatggccgcc
gagctggtcgagacgtcgcggctgtgggctcgggtcaccgcgcggatcgaacccgaatgg
gccgagaagctcgccccgcacctggtcaagcgcacctactccgaaccgcactggtccacc
aggcgcgaggccgccatggcctacgagcgggtcacactctacggcattcccctggtcgcg
caacggcccgtgcagtacggcccgatcgaccgcgaggcctcacgcgagctgttcatccgg
catgccctcgtccagggcgaatggcggacgcgccacaggttcttccacgccaaccgtgag
ttgctcaaggacgtggaggcgctcgagcaccgggcccgcaggcgcgacatcctcgtcgac
gacgagaccctgttcgagttctacgaccagcgcgtcggaccggaggtcgtctcggcgcgg
cacttcgacgcgtggtggaagaaggagcggcagaagaatcccgacctgttgaccttcacc
ccggaaacggtggtcaaccaggaggcgcccaccgtcctcggcggcgactaccccgacgcg
tggcggcagggcgatctgcagttccccctcacctaccagttcgagcccggcaccgaggag
gacggcgtcaccgtccgcattcccgtcgcgctgctggccggggtccggccggtcggcttc
gactggtcggtacccggtatgcgggtcgagctggtcaccgccctgatcaagacgcttccc
aagcatcttcgccgccaagtcgttccggcaccggacttcgctgcggcagccctcgcgtcc
gtgcagccgcgctccgagccgctcgtcaacgcgatggcgcgggagctgtcgcggctcggc
gcggcgcggatcgagccgagcgacttcgacccgaccgccctgccggaccacctgcggatg
acgttcgcggccgtcgacgaacgcggcgccgtactcgcgcgcagcaagagcctgaccgcg
ctgcgcaggcagctggcgaaccgtgtcgaggccgaggtctcccgggcggcgtcgagcacc
gagcgcgcgccggcactggtatggacagccgagacgctcggcaccctcgagcccacggtc
acacgcaccgtcgccggccagcaggtgaccggatatccgacgctggtcgccgaggatggt
ggcgtggccgtgcgggtgctcagcaccccgcacgcgcagcaggccgcgatgcgcaccggg
ctgcgggccctgctgctcgaggcggtcccgatgcaggcgcgcgccgcgacgtcgggcctg
agcaacggcgaacggctggcgctcggccgcaatccggacggctcgttcgaggatctgctc
gaggactgccgggcgtgcgccgtggacgagctgatcgcccggcacggcaagccggtgcgc
acaccggacgagttcaccgcgctggcgaaggtggtgcgggcccagctgccgggccgggtg
gcggcgctgctgaagctcgtcgtccccgccctggccagggcacacgaggtggaggtgctg
ctcgaacgggtgcgcggcgaggccgccgaggacgtgcgtgaacagctgacctcgctgctg
ttccggggtttcgtcgccgaactcggcagtgcccggctggccgacctgccccgctacctg
gcggcggcggcacaccggctcgaatcgctgccggcgagcgcgcttcgcgaccggcagggc
atggacgtgctggaccgggtctacgccgagtacgaccgactgctcgcccggctgccggag
gagcgggccacggctgccgacgtggtggaggtctcgtggatgatcgaggagttgcgggtc
agcctgttcgcgcagcacctcggcacccgcgggccgatctcggagacgcgaatcctcaag
gccgtcgcggcgattcgctga
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