Rhodococcus sp. WB1: A4U64_15405
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Entry
A4U64_15405 CDS
T10270
Name
(GenBank) pseudouridine-5-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
rhow Rhodococcus sp. WB1
Pathway
rhow00240
Pyrimidine metabolism
rhow01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhow00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
A4U64_15405
Enzymes [BR:
rhow01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
A4U64_15405
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
BON
Motif
Other DBs
NCBI-ProteinID:
ANZ25900
LinkDB
All DBs
Position
complement(3497293..3498210)
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AA seq
305 aa
AA seq
DB search
MDPVIRISDEVRDAVAARRPVVALESTIFTHGLPRPRNLEVALEAEARLREADVVPATVG
VLRGVPTVGLSTDEIADLATAETVTKLSVRDLPIAVARRLSGGTTVAATALLAHRGGVEV
FATGGLGGVHRGAQSTFDESADLVALSTVPILVVSAGVKSILDIPATLERLETLSIPVVG
YRTTSFPGFYIRDSGCPLEHSVGSPAEVAALVRARDALGLKAGVLLANPVSEDDQLDPAL
HARVLHEAEERAAAAGVVGKDTTPFLLDHFHRATGGRSLDVNVEVYRGNVALGGAVATAL
AAEPR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggacccggtgatccggatatcggacgaggtgcgcgacgccgtcgcagcccgccggccg
gtggtggccctggaatcgacgatcttcacccacggcctgccgcgcccccgcaacctcgag
gtggcgctcgaggcggaggcgcggttgcgggaggcggacgtcgtccccgccaccgtcggc
gtgcttcgcggcgtccccaccgtggggctgtccaccgacgagatcgccgacctcgcgacg
gcggagacggtgacgaagctgagtgtgcgcgacctgccgatcgccgtggcgcgacgactg
tccggcggcaccaccgttgccgccacggcgctgctcgcacaccgcggcggggtcgaggtc
ttcgcgacgggcgggctgggcggcgtgcaccgcggcgcgcagagcaccttcgacgagtcc
gccgacctggtcgccctgtccaccgtgccgatcctcgtcgtcagcgccggcgtcaagtcg
atcctcgacatcccggccacgctggagcggctcgagaccctgagcattccggtcgtcggc
taccgcacgaccagcttccccggcttctacatccgcgacagcggctgcccgctcgaacat
tccgtcgggtcgccggccgaggtcgccgcccttgtccgtgcccgggacgcactcggcctg
aaagccggcgtcctgcttgcgaatccggtatcggaagacgaccagctcgaccccgcgctg
catgcgcgggtgctgcacgaggccgaggagcgggccgcggcggccggagtggtcggcaag
gacaccacgccgttcctgctcgaccacttccaccgcgcgaccggcggccgcagcctcgat
gtcaatgtcgaggtctatcggggcaatgtcgcgctcggcggtgccgtcgccacggcgctc
gccgccgaaccgcgatag
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