Rhodococcus sp. WB1: A4U64_24105
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Entry
A4U64_24105 CDS
T10270
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhow Rhodococcus sp. WB1
Brite
KEGG Orthology (KO) [BR:
rhow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhow03400
]
A4U64_24105
Enzymes [BR:
rhow01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
A4U64_24105
DNA repair and recombination proteins [BR:
rhow03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
A4U64_24105
Prokaryotic type
A4U64_24105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ANZ27412
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All DBs
Position
5368538..5369902
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AA seq
454 aa
AA seq
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MSRPGIVWFRRDLRLRDLPTLLSVADTSDRALALFVLDESLLRPSGSPRRTFLMRCLRAL
DEDLGGRLLVTHGDPVTVVPALARELDADAVHISSDHGPYGTRRDEAVERALGDVPLVRT
GSPYAVAPGRVRKPDDTPYKVFTPFQRAWHEHGWRAPAATDAGTVDWIDPGNLDARVPIP
GDDDLDGVTLPAAGEAAALHRWHEFRDDDLPHYDTERDRPDLDRTSRLSPYLKFGCIHPR
TLLHDVRSDHGGAANRLRSELAWRDFYADVLYHRPDTARRNYNRRFDHITYDSGPDAERA
FAAWKEGRTGFPIVDAGMRQLLAEGWMHNRLRMIVASFLAKDLHLPWWWGARHFMNRLVD
GDLASNQHGWQWTAGSGTDAAPYFRVFNPITQGEKFDPTGEYVRRWVPELRGVNGKRVHR
LPDGPPDGYPAPIVDHAHERQVALDRYGRIGGKG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgacccggtatcgtctggttccgccgtgatctgcggctgcgggacctgcccacc
ctgttgtccgtcgccgacacctccgaccgggcactcgcgctgttcgtgctcgacgagtcg
ctgctgcgcccgtccggatccccgcgccgcaccttcctcatgcggtgcctgcgcgccctc
gacgaggacctgggcggacggctgctcgtcacccacggcgaccccgtcaccgtcgtcccg
gcactcgcccgggaactcgacgccgacgcggtgcacatcagttccgaccacggcccctac
ggcacccgccgcgacgaggccgtcgagcgggcgctcggcgatgtcccgctggtgcgcacc
ggctcgccctacgccgtcgcgcccggccgcgtccgtaagcccgacgacaccccctacaag
gtgttcacccccttccagcgggcgtggcacgaacacggctggcgagccccggccgccacc
gacgccggcaccgtcgactggatcgaccccggcaatctcgacgcgcgggtgccgatcccc
ggcgacgacgacctcgacggggtcacgctgccagccgccggggaagccgccgcgctgcac
cgctggcacgagttccgcgacgacgacctgccgcactacgacaccgagcgggaccgaccg
gacctcgaccgcaccagccggctctccccctacctgaagttcgggtgcatccacccgcgc
accctgctgcacgacgtgcgatccgaccacggcggcgcggcgaaccggctgcgcagcgaa
ctggcctggcgcgacttctatgcggacgtgctgtaccaccggcccgacacggcccgccgc
aactacaaccgccgcttcgaccacatcacctacgacagcggccccgacgccgaacgtgcc
ttcgccgcatggaaggagggccgtaccggcttccccatcgtggacgcgggcatgcggcag
ctgctcgccgagggctggatgcacaaccggctccgcatgatcgtcgcgtccttcctcgcc
aaggatctgcacctgccctggtggtggggcgcccggcatttcatgaaccggctcgtcgac
ggcgacctggcctcgaaccagcacgggtggcagtggaccgccggcagcggcaccgacgcc
gcgccctacttccgggtgttcaacccgatcacgcagggcgagaagttcgatccgacgggt
gaatacgtgcgccgttgggtacccgagctgcggggcgtgaacggcaaacgcgtgcaccgg
ctcccggacggtccgccggacgggtacccggcgccgatcgtcgaccacgcccacgaacgg
caggtggcactcgaccggtacgggcggatcggcggaaaaggctga
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