Rhodococcus sp. WB1: A4U64_24905
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Entry
A4U64_24905 CDS
T10270
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhow Rhodococcus sp. WB1
Pathway
rhow03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhow00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4U64_24905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhow03019
]
A4U64_24905
03110 Chaperones and folding catalysts [BR:
rhow03110
]
A4U64_24905
03029 Mitochondrial biogenesis [BR:
rhow03029
]
A4U64_24905
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhow04147
]
A4U64_24905
Enzymes [BR:
rhow01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A4U64_24905
Messenger RNA biogenesis [BR:
rhow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A4U64_24905
Chaperones and folding catalysts [BR:
rhow03110
]
Heat shock proteins
HSP60 / Chaperonin
A4U64_24905
Mitochondrial biogenesis [BR:
rhow03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A4U64_24905
Exosome [BR:
rhow04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A4U64_24905
Exosomal proteins of other body fluids (saliva and urine)
A4U64_24905
Exosomal proteins of breast cancer cells
A4U64_24905
Exosomal proteins of colorectal cancer cells
A4U64_24905
Exosomal proteins of bladder cancer cells
A4U64_24905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
GreA_GreB_N
Motif
Other DBs
NCBI-ProteinID:
ANZ27554
LinkDB
All DBs
Position
5553764..5555413
Genome browser
AA seq
549 aa
AA seq
DB search
MAKDLRFNQEARLLLEYGVNALADAVKVTLGPKGRNAVLEKLTGPPTITNDGVTIAREIQ
LRDPFANMGAQLVKEVAMKTNGVVGDGTTTATVLAQAMVREGMRAVDAGANPMRVRRGIE
RTVPVVVEALRDRSVQVDGRKDLERIATLAASDDEAIGEAIAEAVSHVGRSGIVTTEESE
TLGMSVSVVDGIEFDHGYISGYMVTNPERMEAVHENPLILLTNKKITQVQEIMPSIEAAK
RADRPLVVLAEDVDGPALQLLVGGNMHNTMQSVVVRAPGFGHRRVAELQDLAVALGGHVV
AKDTGVELSEVTAEHLGSCDRITVTENETTIVGGHGDQSLLDARIAQLEAQLGRARIDAD
QDSLQLRIARLTGRVAVIRVGGATSVELKERMLRVEDALAATRAALEDGIVAGGGTALGQ
AHRALAELDLPGDEGIGRDVVRRALPEPLRWIAVNAGFDGDEVVEVVAGLPSGHGFNALS
GKYGDMFDEGVVDPFKVTRAALESAASIAALLITTETAIVEEVFGNPGAIHAPGFGDLAE
GMVRPSNIY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggatctgcggttcaaccaggaggcacgcctccttctcgagtacggggtcaac
gcgctcgccgacgcggtcaaggtgaccctcggccccaagggccgaaacgcggtgctcgag
aagctgaccggcccacccaccatcaccaacgacggtgtcacgatcgcccgcgagatccag
ctgcgggacccgttcgccaacatgggcgcgcagctggtcaaggaagtggcaatgaagacc
aacggcgtcgtcggtgacggcaccacgaccgcgaccgtgctggcgcaggccatggtccgc
gaggggatgcgggccgtcgacgccggtgccaatcccatgcgggtgcggcgcggcatcgaa
cgcaccgttcccgtcgtcgtcgaggcactgcgggaccggtcggtgcaggtcgacggacgc
aaggatctcgagcgcatcgcgaccctcgccgcgagcgacgacgaggccatcggcgaggcc
atcgccgaggcggtctcccacgtgggcaggtccggcatcgtcaccaccgaggagagcgag
accctcgggatgtcggtgagcgtcgtcgacggcatcgaattcgaccacggctacatctcc
ggctacatggtgaccaaccccgaacgcatggaagcggtccacgagaatccgctgatcctg
ttgaccaacaagaagatcacccaggtgcaggagatcatgccgagcatcgaggcggccaag
cgcgccgatcggcccctcgtcgtgctggccgaggacgtcgacggccccgccctgcagctc
ctcgtcggcggcaacatgcacaacaccatgcagtccgtcgtcgtgcgggcgcccggcttc
gggcaccggcgcgtcgccgagctgcaggacctcgcggtcgcgctgggcgggcacgtcgtc
gccaaggacaccggcgtcgaactgtccgaggtgacggccgagcacctcggttcctgcgac
cgcatcaccgtcaccgagaacgagacgacgatcgtcggcggccacggcgatcagagtctc
ctcgatgcgcggatcgcgcagctcgaggcgcagctcggacgggcccggatcgacgccgac
caggacagcctccagctgcgcatcgcccggctcaccgggcgggtcgccgtcatccgcgtc
ggcggcgccaccagcgtcgaactcaaggaacgcatgctgcgcgtcgaggacgccctggcc
gccacccgggccgccctcgaggacggcatcgtcgccgggggcggcaccgccctggggcag
gcgcaccgggcgctggccgagctcgacctgcccggcgacgaaggcatcggccgcgacgtg
gtgcggcgtgccctgcccgagccgctccggtggatcgcggtcaacgccggcttcgacggc
gacgaggtcgtggaggtcgtcgcggggctgccgtcgggacacgggttcaacgcgctctcc
ggcaagtacggcgacatgttcgacgagggcgtcgtcgacccgttcaaggtcacccgcgcc
gcgctcgagagcgccgcgtccatcgcggcgctgctcatcaccaccgagaccgcgatcgtg
gaggaggtcttcggcaaccccggggcgatccacgcgcccggcttcggggacctggccgag
ggcatggtccgcccgtccaacatctactga
DBGET
integrated database retrieval system
