Rhodococcus sp. WB1: A4U64_25970
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Entry
A4U64_25970 CDS
T10270
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhow Rhodococcus sp. WB1
Pathway
rhow00061
Fatty acid biosynthesis
rhow00071
Fatty acid degradation
rhow01100
Metabolic pathways
rhow01212
Fatty acid metabolism
rhow02024
Quorum sensing
rhow04146
Peroxisome
Module
rhow_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhow00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
A4U64_25970
00071 Fatty acid degradation
A4U64_25970
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
A4U64_25970
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4U64_25970
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhow01004
]
A4U64_25970
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhow04147
]
A4U64_25970
Enzymes [BR:
rhow01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
A4U64_25970
Lipid biosynthesis proteins [BR:
rhow01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
A4U64_25970
Exosome [BR:
rhow04147
]
Exosomal proteins
Exosomal proteins of breast milk
A4U64_25970
Exosomal proteins of breast cancer cells
A4U64_25970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ANZ28459
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All DBs
Position
5789631..5791313
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AA seq
560 aa
AA seq
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MTMNLPDPSTMSLSYPDVTMGVWAPSMAALYGDRPAIVDGERVCTYRELDERSAQFASAL
QGAGVAPRDVVLLHVGNCIEFIVAYYGALRAGATVTLVNPLQPEPGLRKQIEETGAVAAV
TQPQQLGVLLGAAAGTTAVTIVVVSDEPVEVAPTSAAVVRYDEFLAGQPTAFTPAEVAGT
DVAHLAFTGGTTGISKGVRVLHRNVVANVTQMCGWRAAHQVVTTGDGLVALRPIEGLDVH
GVIPGEGATVVVSPLFHAHALINTSFLLLCGLTQVLAGRFDPARMLELVERHRASYITGS
PAMWHALATHPDVARRDTTSVRVVSSGAAPIDHVTLEALGTAFPNARVAEGYGLTEGTCV
VTAMPLIIGSTYRLGSVGLPVFDTEIEIRVQDDPSVVLGEGERGELWVRGPQVTDGYLGH
PEITAQQYVDGWLDTGDIAYRDADGYVYICDRAKDMLIYKGYNVYPRELEEILVSHPAVS
TAAVVGREAGNVGQEPVAFVVPVPGAQPDPAELMAFVAEQVLPYKKIREVVLVDALPTSA
AGKVLKTDLRARIEQAAASR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaacctgccggatccgtcgacgatgtcgctgtcctacccggacgtgacgatg
ggcgtgtgggcgccgagcatggccgccctctacggcgaccgcccggcgatcgtcgacggg
gaacgggtgtgcacgtaccgcgagctcgacgagcgctccgcgcagttcgcctccgccctg
cagggagccggtgtcgccccgcgcgacgtggtgctgctgcacgtgggcaactgcatcgag
ttcatcgtggcctattacggtgcgctgcgggccggcgccaccgtgacgctggtcaacccg
ctgcaaccggaaccgggcctgcgcaagcagatcgaggagacgggcgccgtggcggcggtg
acccagccgcagcagctcggtgtcctcctcggcgccgcggcgggcaccacggccgtgacg
atcgtggtggtctccgacgagccggtggaggtggcccccacctccgcggccgtcgtgcgg
tacgacgagttcctcgccgggcagcccacggcgttcacgccggcggaggtcgccggaacg
gacgtcgcgcacctggccttcaccggcggtaccaccggcatctccaagggcgtgcgcgtg
ctgcaccgcaacgtggtcgccaacgtgacccagatgtgcgggtggcgggccgcccaccag
gtcgtcaccaccggcgacgggctggtcgcgctgcgcccgatcgagggtctcgatgtgcac
ggggtgatccccggcgagggcgccaccgtcgtcgtgtcgcccctgttccatgcccacgcg
ctgatcaacacgtcgttcctgctgctgtgcggcctcacccaggtgctcgcgggccgcttc
gaccccgcccgcatgctcgagctcgtggagcggcaccgcgccagctacatcaccggcagc
ccggccatgtggcatgcgctggccacccaccccgacgtcgcccgccgtgacaccacgtcg
gtgcgggtcgtgtcgtcgggggcggcgccgatcgaccacgtcacgctcgaggcgctcggt
acggcgttcccgaacgcccgcgtggccgagggctacggcctgaccgagggcacgtgtgtg
gtcaccgccatgccgctgatcatcgggtccacctatcgtctcggcagtgtgggcctgccc
gtcttcgacaccgagatcgagatccgggtccaggacgatccgagcgtcgtcctcggcgag
ggcgagcgcggcgaactgtgggtccgtgggcctcaggtgaccgacggctacctcggccat
cccgagatcacggcccagcagtacgtggacggctggctcgacaccggcgacatcgcctac
cgcgacgccgacggctacgtctatatctgcgaccgcgccaaggacatgctgatctacaag
ggctacaacgtgtatccgcgtgagctcgaggagatcctggtgtcccatcctgcggtgtcg
acggcggcggtggtcggccgcgaggccggcaacgtcgggcaggaaccggtcgccttcgtg
gtgccggtgccgggcgcgcagcccgaccctgccgagctgatggcattcgttgccgagcag
gtcctgccctacaagaagattcgcgaggtcgtcctcgtggacgcgctgcccacctccgcg
gcgggcaaggtgctcaagacggatctgcgggcccggatcgagcaggccgcggcctcacgc
tga
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