Rhodococcus sp. D-6: RBB84_00850
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Entry
RBB84_00850 CDS
T10622
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhox Rhodococcus sp. D-6
Pathway
rhox03420
Nucleotide excision repair
rhox03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RBB84_00850 (pcrA)
03430 Mismatch repair
RBB84_00850 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhox03400
]
RBB84_00850 (pcrA)
Enzymes [BR:
rhox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RBB84_00850 (pcrA)
DNA repair and recombination proteins [BR:
rhox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RBB84_00850 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
RBB84_00850 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
OstA_2
DEAD
AAA_22
ResIII
Serine_rich
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XBW04564
UniProt:
A0AAU7UXQ7
LinkDB
All DBs
Position
164554..166932
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AA seq
792 aa
AA seq
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MNTPVALANSRPGSDALLEGLNPQQREAVTHEGAPLLIVAGAGSGKTAVLTRRIAYLLAE
RDVVPGQVLAITFTNKAAAEMRERVAALVGPRANAMWVSTFHSSCVRILRAQAGLLQGMN
SNFTIYDADDSRRLLTMIAKDLELDSKKYSARLLSTQISNLKNELIGPEEAAHEAETDSA
ATELTRVVARVYAHYQQRLRTANAFDFDDLIGETVALLQAHPQVAEYYRRRFRHVLVDEY
QDTNHAQYVLVRTLVGDPEEESAVPPSELCVVGDADQSIYAFRGATIRNIEEFERDYPQA
RTILLEQNYRSTQNILSAANSVISKNTGRREKRLWTDSGEGELITGYVADNEHDEARFVA
AEIDRLVDGGDTTYSDIAVFYRTNNASRAFEDVFIRHGVPYKVVGGVRFYERKEVRDVVA
YLKVLDNPDDTVSLRRILNTPRRGIGDRAEACVAVHAERLGVSFGQALADAAAGKVALLN
TRAQKAIAGFVEMMDRLRAMLVASDADGNDMVDIGDVVEAILDRTGYSAELSASDDPQDG
ARLDNLHELVSVAREFSADVRNAAGIVDDEREEGDPEPGSLAAFLEKVSLVADADQIPEN
EAGVVTLMTLHTAKGLEFPVVFVTGWEDGQFPHMRALGDPAELSEERRLAYVGITRARRR
LYLTRAVLRSSWGQPLTNPESRFLQEIPQHLIDWRRLEPTPARGQAIGSGTGSRFGAGER
RGSSGTPSFGAARGRNNHLVLDVGDRVSHDKYGLGTVLETRGSGPTATVVIDFGSAGKVR
LMLVGGVPMIKL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaacactcccgtcgcgctcgcaaactcccgccccggatccgatgctcttctcgaaggg
ctcaatccgcagcagcgggaagcggtcacgcacgaaggagccccgctgctgatcgtcgcg
ggcgcgggctccggcaagactgcggtgctcacgcgtcgcatcgcctatctgctggccgag
cgcgacgtcgtccctggtcaggtgctcgccatcacgttcaccaacaaggccgccgccgag
atgcgcgagcgggtggcggccctggtggggccgcgcgcaaatgcgatgtgggtctcgacc
ttccactcgagctgcgtccggatcctgcgcgcgcaggcgggtctgctgcagggcatgaat
tcgaatttcacgatctacgacgccgacgattcccgtcgtctgctcacgatgatcgcgaag
gatctcgaactcgacagcaagaagtactccgcccggctgctgtccacacagatctcgaac
ctgaagaacgaactgatcgggccggaagaagccgcccacgaggcggagaccgattcggcg
gccaccgaactcacccgcgtcgtcgctcgggtctacgcgcactaccagcagcgcctgcgc
acggcgaacgccttcgacttcgacgacctcatcggcgagacggtggcgctgctgcaggct
catccgcaggtcgccgagtactaccggcgccggttccgtcacgtcctggtcgacgagtac
caggacaccaaccacgcgcagtacgtgctggtgcgcaccctcgtgggcgatccggaggag
gaatccgccgtccccccgagcgaactgtgcgtggtgggcgacgccgaccagtcgatctac
gccttccgcggcgccacgatccgcaacatcgaggagttcgagcgcgactatccgcaggcg
cgcacgatcctgctcgaacagaattaccgctccacccagaacatcttgtcggcggccaat
tccgtcatctccaagaacacgggtcgccgcgagaagcggctgtggaccgattcgggtgag
ggcgaactcatcaccggctacgtcgccgacaacgagcacgacgaggcgcggttcgtcgcc
gccgagatcgaccggctcgtcgacggcggcgacaccacctactccgacatcgcggtgttc
taccgcaccaacaatgcctcccgcgcgttcgaggacgtcttcatccggcacggtgtgccc
tacaaggtcgtcggcggtgtgcggttctacgagcgcaaggaggtgcgcgacgtcgttgcg
tacctgaaggtgctcgacaaccccgacgacacggtgagcctgcgccgcatcctcaacacc
cctcgccgcggtatcggcgatcgtgccgaggcgtgcgtggcggtgcacgccgagcggctc
ggtgtgagcttcgggcaggccctcgccgacgccgcggccggcaaggtcgcgctgctgaac
acgcgggcgcagaaggcgatcgccggtttcgtcgagatgatggaccgcctgcgggcgatg
ctcgtcgcgagcgacgccgacggcaacgacatggtggacatcggcgacgtcgtcgaggcg
atcctcgatcgcaccggatacagcgccgagttgtcggcgagcgacgacccgcaggacggc
gcccgtctcgacaacctccacgaactcgtcagcgtggcaagggaattcagtgccgacgtc
cgtaacgcggccgggatcgtcgacgacgaacgtgaagagggggatcccgaaccgggatcg
ctcgcggcgttcctcgagaaggtctcgctcgtcgccgacgccgaccagatcccggagaac
gaggccggtgtggtcacgctgatgacgttgcacaccgcgaagggcctcgagttcccggtt
gtgttcgtcaccggttgggaggacggccagttcccgcacatgcgtgccctcggcgatccg
gccgagctgtccgaggaacggcgactcgcgtatgtcggcatcacgcgcgcccggcgtcgt
ctctacctcacgcgggccgtactgcgttcgtcctgggggcagccgctcaccaatccggaa
tctcgtttcctgcaagagattccgcagcacctcatcgactggcgacgcctcgagcccacg
cccgcccgtggtcaggcgatcggctcgggcaccggttcacggttcggtgcgggcgagcgg
cgcggatcctcgggaacaccgagtttcggtgcggcgcgcggacgcaacaaccacttggtg
ctcgacgtcggcgaccgcgtcagccacgacaagtacggtctcggaacggttctcgaaact
cggggctcgggccccacggccaccgtcgtgatcgacttcggcagtgccggcaaggtgcgg
ttgatgctcgtcggcggtgtgccgatgatcaaactgtga
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