Rhodococcus sp. D-6: RBB84_03035
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Entry
RBB84_03035 CDS
T10622
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rhox Rhodococcus sp. D-6
Pathway
rhox03018
RNA degradation
Brite
Enzymes [BR:
rhox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RBB84_03035
Messenger RNA biogenesis [BR:
rhox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RBB84_03035
Ribosome biogenesis [BR:
rhox03009
]
Prokaryotic type
rRNA helicases
RBB84_03035
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XBW04965
UniProt:
A0AAU7UY46
LinkDB
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Position
614469..616349
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AA seq
626 aa
AA seq
DB search
MSDIQDAPDQETAALTFADLDIDARVLQALSDVGYESPSPIQAATIPPLLEGRDVVGLAQ
TGTGKTAAFAVPILSRIDTSVKRPQALVLAPTRELALQVAEAFGKYSVHIPGLSVLPIYG
GQAYGVQLSGLRRGAQVIVGTPGRVIDHLAKGTLDISELEFLVLDEADEMLTMGFQEDVE
RILADTPDTKQVALFSATMPGAIRRLSKQYLKDPQEITVKSKTTTSANISQRWVLVSHQR
KLDALTRILEVETFEAMIIFVRTKQATEDLAERLRARGFSAAAINGDIVQAQRERTINQL
KNGTLDILVATDVAARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRTGDALLFVAP
RERHLLKAIERATRQPLAEMQLPTVEDVNAQRVSKFNDSITEALASDHLQLFRTFIEDYE
REHDVPLADIAAALAVLSRDGESFLMEAEPEPVAPPRREREPRERPPRRFDDGPKVGRDG
QEMTTYRIAVGKRHRVQPGAIVGAIANEGGLRRGDFGHISIRADHSLVELPKDLSPQTLD
ALRSTRISGVLIQLQPDSGAPSGRPSSYRGRDDRRGDDRRGGDRRDHGKRDRGGKREYGD
SRGGRSGDFTHRSDRNDRGGRGGYRD
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatattcaagacgcccccgaccaggagaccgcagctctcacgtttgccgatctc
gacatcgatgcacgtgtgctgcaagctctttcggatgtgggttacgagtccccgtcgccg
atccaggcggcgaccatcccaccgctgctggagggacgggacgtcgtcggtctcgctcag
accggcaccggcaagaccgccgccttcgcggtgccgatcctctcgcgtatcgacacctcc
gtgaagcggccccaggcgctggtgctggcgcccacccgcgagctcgcgctgcaggtcgcg
gaggctttcggtaagtattccgtccatatcccgggcctgtccgtcctgcccatctacggc
ggtcaggcatacggtgtacagctgtccggtctccgccgcggcgcccaggtcatcgtcggc
acccccggacgtgtgatcgatcacctcgccaagggcaccctcgacatctccgaactcgag
ttcctcgtcctcgacgaggccgacgagatgctcaccatgggcttccaggaggacgtcgag
cgcatcctcgccgacacccccgacaccaagcaggtcgcgctgttctccgcgaccatgccg
ggcgcgatccgccggctgtcgaagcagtacctgaaggatccgcaggagatcaccgtcaag
tcgaagacgacgacgtcggcgaacatctcccagcgctgggttctcgtctcccatcagcgc
aagctcgacgcgctgacccgaatcctcgaggtcgagaccttcgaggccatgatcatcttc
gtgcgcacgaagcaggccaccgaggacctggccgagcgcctgcgcgcccgcggtttctcc
gccgccgccatcaacggcgacatcgtgcaggcccagcgcgagcgcacgatcaaccagctc
aagaacggcacgctcgacatcctcgtcgccaccgacgtcgccgcgcgtggtctcgacgtc
gagcgcatcagccatgtcgtcaactacgacatccctcacgacaccgagtcgtacgtgcac
cgcatcggccgcacaggccgcgccggccgcaccggcgacgcgctgctgttcgtcgctccg
cgcgagcgtcacctgctcaaggcgatcgagcgggccacccgccagccgctcgccgagatg
cagctgcccaccgtcgaggacgtcaacgcccagcgcgtatcgaagttcaacgactcgatc
accgaggcgctcgcctccgatcacctgcagctgttccgcaccttcatcgaggactacgag
cgtgagcacgacgtgccgctcgccgacatcgcggccgcgctggcggtgctgtctcgcgac
ggcgagtcgttcctcatggaggccgaacccgagccggtcgcaccgccgcgccgcgagcgc
gaaccgcgcgagcgtccgccgcgtcgcttcgacgacgggccgaaggtcggtcgcgacggc
caggagatgaccacctaccgcatcgccgtaggcaagcgtcaccgcgtgcagcccggtgcg
atcgtcggtgccatcgccaacgagggcggactgcgccgcggcgatttcgggcacatcagc
atccgtgccgatcacagcctcgtcgagctgccgaaggatctgtcgccgcagaccctcgac
gcgctgcgctccacccgcatctcgggcgtgctcatccagctgcagcccgactccggcgca
ccgtccggacgtcccagctcgtatcgcggacgcgacgaccgtcgcggcgacgatcgacgc
gggggagaccgtcgcgatcacggcaagcgcgatcgtggcggcaagcgcgagtacggcgac
agccgtggcggccgctccggcgacttcacgcaccgcagcgaccgcaacgatcgtggtggt
cgcggcggataccgcgactga
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