KEGG   Rhodococcus sp. D-6: RBB84_03065
Entry
RBB84_03065       CDS       T10622                                 
Name
(GenBank) deoxyribonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
rhox  Rhodococcus sp. D-6
Pathway
rhox03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rhox00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RBB84_03065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhox03400]
    RBB84_03065
Enzymes [BR:rhox01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     RBB84_03065
DNA repair and recombination proteins [BR:rhox03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RBB84_03065
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: XBW04971
UniProt: A0AAU7V0X4
LinkDB
Position
complement(621315..622085)
AA seq 256 aa
MRIGAHVRQDDDPIGQGEHLGADLVQVFLSDPQKWTKPGEHPRTEEILASDVDVVVHSPY
VINVASLNNRVRMPSRKAVADHAEAAARIGALGLVVHGGHVRAGEDVAAGVENWRKLFER
QEDKGGFGVPILVENTAGGDFAMARYIDAIGRLWDAIGDYGPGFCLDTCHAWAGGEDLVG
VVERVRAVTGRIDLVHLNNSRDEFDSARDRHANLADGQIDPQLLAEIAVQADAPIVLETP
AEGLAEDIAFLREHST
NT seq 771 nt   +upstreamnt  +downstreamnt
atgcggataggtgcgcacgtccggcaggacgacgatcccatcggtcagggcgaacatctc
ggtgccgatctggtgcaggtgttcctgtcggacccgcagaaatggacgaagcccggtgag
catccgcgcaccgaggagatcctcgcatcggacgtcgacgtggtggtgcactcgccgtac
gtcatcaacgtagcgagcctgaacaacagggtgcggatgccgtcgcgcaaggccgtcgcc
gaccacgccgaggcggccgcgcgtatcggtgcgctcgggctggtggtccacggcgggcac
gtgcgcgcgggtgaggacgtcgccgccggggtggagaactggcgcaagctgttcgaacgg
caggaggacaagggcgggttcggggtgccgatcctcgtcgagaacacggcgggcggcgac
ttcgcgatggcccgctacatcgacgcgatcggacgtctgtgggacgccatcggcgactac
ggtcccggcttctgcctcgacacctgccacgcctgggcgggcggtgaggatctcgtcggt
gtcgtcgaacgggtgcgtgcggtcaccggccggatcgatctggtgcacctgaacaattcg
cgtgacgagttcgattcggcccgcgaccggcacgccaatctcgccgacgggcagatcgat
ccgcagttgctcgcggagatcgcggtgcaggccgacgcaccgatcgtgctcgagaccccg
gcggagggactcgccgaggacatcgccttcctgcgggagcactcgacctga

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