Rhodococcus sp. D-6: RBB84_05195
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Entry
RBB84_05195 CDS
T10622
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rhox Rhodococcus sp. D-6
Pathway
rhox02024
Quorum sensing
rhox03060
Protein export
rhox03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RBB84_05195 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RBB84_05195 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RBB84_05195 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhox02044
]
RBB84_05195 (ffh)
Enzymes [BR:
rhox01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RBB84_05195 (ffh)
Secretion system [BR:
rhox02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RBB84_05195 (ffh)
Eukaryotic Sec-SRP protein
RBB84_05195 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
ArsA_ATPase
APS_kinase
nSTAND3
Zeta_toxin
AAA_22
AAA_31
NPHP3_N
AAA_18
Thymidylate_kin
AAA_24
TsaE
AAA_33
6PF2K
MobB
MeaB
TctA
AAA_16
NTPase_1
ATP_bind_1
AAA_30
ABC_tran
hnRNP_Q_AcD
NACHT
Motif
Other DBs
NCBI-ProteinID:
XBW05345
UniProt:
A0AAU7UZX3
LinkDB
All DBs
Position
1096365..1097933
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AA seq
522 aa
AA seq
DB search
MFESLSDRLTGVLKDLRGKGRLSDADIDATCREIRLALLEADVALPVVREFIKKIKVRAK
GAEVHGALNPAQQVVKIVNEELVGILGGETRRLQFAKNPPTVIMLAGLQGAGKTTLAGKL
AKWLKAQGHTPMLVACDLQRPGAVTQLQVVGERAGVSVFAPHPGTSIGGGENELGVTAAD
PIAVAEQGIAEARNKQYDVVIVDTAGRLGIDQELMAQAAGIRDAVQPDEVLFVLDAMIGQ
DAVSTAEAFREGVGFTGVVLTKLDGDARGGAALSVRELTGQPIMFASTGEKLEDFDVFHP
ERMASRILGMGDVLTLIEQAEQVFDAEQAEATANKIGSGELTLEDFLEQMMAVRKMGPIA
NLLGMLPGAGQMKDALANVDEKQLDRIQAIIRGMTPEERANPKIINGSRRLRIANGSGVK
VSDVNQLVDRFFEARKMMTAMAGQMGMPGARKNQRKKGKKGKKGGRGPTPPKVRGGMPGG
FPGLPGGMPAGMPDLSKMPKGLDELPPGLENFDLSKLKFPKN
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatccctttccgacaggttgacaggggtcctgaaggacctgcgcggcaagggg
cggctgtccgacgcggacatcgacgcgacctgccgtgagatccgcctcgccctgctcgag
gccgacgtcgcgctgcccgtcgtgcgcgagttcatcaagaagatcaaggtgcgcgccaag
ggcgccgaggtgcatggcgcgctcaacccggcccagcaggtcgtcaagatcgtcaacgag
gaactcgtcgggatcctcggcggcgagacccgtcgtctgcagttcgcgaagaacccgccg
acggtcatcatgctcgccggtctgcagggtgccggtaagaccacgctcgcgggtaagctc
gcgaagtggctcaaggcgcaggggcacaccccgatgctggtcgcctgcgacctccagcgc
cccggcgctgtgacccagctgcaggtggtcggtgagcgtgccggcgtgtcggtcttcgcg
ccccatcccggcacctccatcggcggaggcgagaacgaactcggagtcaccgccgccgac
ccgatcgccgtggccgagcagggcatcgccgaggcgcgcaacaagcagtacgacgtggtc
atcgtcgacaccgccggtcgcctcggtatcgaccaggaactcatggcgcaggccgcgggc
atccgcgacgccgtgcagcccgacgaggtgttgttcgtcctcgacgcgatgatcggtcag
gacgccgtgagcacagccgaggcgttccgcgagggcgtcggcttcaccggcgtggtgctc
accaagctcgacggcgacgctcgcggaggtgccgcgctcagcgtccgcgagctcaccggc
cagccgatcatgttcgcctccaccggtgagaagctcgaggacttcgacgtcttccacccc
gagcgcatggccagccgcatcctcggcatgggcgacgtgctcaccctgatcgagcaggcc
gagcaggtcttcgacgccgagcaggccgaggccaccgccaacaagatcggttccggcgag
ctcaccctcgaggacttcctcgagcagatgatggccgtgcggaagatgggccccatcgcc
aatctcctgggcatgctgcccggagccgggcagatgaaggacgccctcgccaacgtcgac
gagaagcagctcgaccgcatccaggcgatcatccgcggcatgacgccggaggagcgcgcc
aacccgaagatcatcaacggctcgcggcgattgcgcatcgccaacggttccggtgtgaag
gtctccgacgtcaaccagctcgtcgaccggttcttcgaggcccggaagatgatgacggcc
atggccggccagatgggcatgccgggcgcacgcaagaatcagcgcaagaagggcaagaag
gggaagaagggcggtcgcggaccgacgccgccgaaggtgcggggcggtatgcccggcggc
ttccccggtctcccgggtggcatgcccgccgggatgcccgacctgtcgaagatgccgaag
ggcctcgacgagcttcctccgggactcgagaacttcgacctgtcgaagctgaagttcccc
aagaactga
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