Rhodococcus sp. D-6: RBB84_05515
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Entry
RBB84_05515 CDS
T10622
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhox Rhodococcus sp. D-6
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhox03016
]
RBB84_05515 (truB)
Enzymes [BR:
rhox01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RBB84_05515 (truB)
Transfer RNA biogenesis [BR:
rhox03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RBB84_05515 (truB)
Prokaryotic type
RBB84_05515 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
XBW05401
UniProt:
A0AAU7UZD7
LinkDB
All DBs
Position
1161428..1162351
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AA seq
307 aa
AA seq
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MNDAAPPQEHPALARAGLLVVDKPAGMTSHDVVARCRRLLGTRKVGHAGTLDPMATGVLV
LGVERATKLLGLLALTTKSYTATIRLGQSTVTDDAEGETVATTDATHVTDEQIGEGVAAL
TGDIQQVPASVSAIKIDGKRAYARMREGEAVELKARPVTVSRFDVLARRDVPGSGFVDVD
VDVDCSSGTYIRALARDLGAALGVGGHLTALRRTKVGPFGLEHARTLEQLADDPTPSLDI
DAAVRTAFECRTISDEEVGLLANGRWLEPVGIHGVYGAVDAQGRAAALLQEKGKRAAAVF
VVRPSNM
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgccgcacccccgcaggaacatccggcactcgcccgcgcaggcctgctcgtc
gtcgacaagcccgccggcatgacgagccacgacgtggtggcgcgctgccgccgactgctc
ggcacccgcaaggtcgggcacgcgggcactctcgaccccatggcgacgggcgtgctcgtc
ctcggcgtcgagcgcgccaccaagctgctcgggctgctcgcactgacgaccaagtcgtac
accgcgacgatccgtctcgggcagagcaccgtcacggacgacgcggaaggcgagaccgtc
gcgaccaccgatgcgacgcacgtgaccgacgagcagatcggcgagggcgtggccgcgctg
acaggcgacatccagcaggtgcccgccagcgtcagcgccatcaagatcgacggcaagcgc
gcctacgcccgcatgcgcgagggggaggcggtcgagttgaaggcccggccggtcacggtc
tcgcggttcgacgtcctcgcccgccgcgatgtgcccgggagcggcttcgtggacgtcgac
gtcgacgtggactgctcgtccggcacctacattcgggcgctcgcacgcgatctcggcgcg
gccctcggagtgggcggtcatctcacggcgctgcgtcgcacgaaggtcggcccgttcggc
ctcgaacatgcccgcacgctcgaacagctcgccgacgacccgacgccgagcctcgacatc
gacgcggccgtgcgcacggccttcgagtgccgcaccatcagcgacgaggaggtggggctg
ctcgcgaacggccgctggctcgagcccgtcgggatccacggcgtctacggcgccgtggat
gcgcagggtcgggccgcagcgctgctgcaggagaagggcaagcgggctgcggcggtgttc
gtggtgcgcccctccaacatgtga
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