Rhodococcus sp. D-6: RBB84_05550
Help
Entry
RBB84_05550 CDS
T10622
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rhox Rhodococcus sp. D-6
Pathway
rhox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RBB84_05550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhox03019
]
RBB84_05550
03016 Transfer RNA biogenesis [BR:
rhox03016
]
RBB84_05550
Enzymes [BR:
rhox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RBB84_05550
Messenger RNA biogenesis [BR:
rhox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RBB84_05550
Transfer RNA biogenesis [BR:
rhox03016
]
Prokaryotic type
tRNA degradation factors
RBB84_05550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
KH_NusA_1st
KH_KhpA-B
S1_RRP5
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
XBW05408
UniProt:
A0AAU7V1S2
LinkDB
All DBs
Position
1168050..1170335
Genome browser
AA seq
761 aa
AA seq
DB search
MTSTTAVEIDEGVYETTATLDNGAYGTRTIRFETGRLARQAAGSVVAYLDDETMLLSATS
ASKQPKDQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVD
GLRNEIQVVVTVLSLNPNDLYDVVAINAASASTQLAGLPFSGPVGGVRVALIVSDDNKSG
QWVAFPTVEQLENAVFDMVVAGRIVGGGDNPDTADVAIMMVEAEATENVIALVDGGAQAP
TESVVAEGLEAAKPFIARLCIAQQQLAAASAKPTGEFPLFPPYQDDVYTAVESAASEKLA
EALTIAGKQERDDRTDEIKVEVLEQVAPNFEGREKEIGAAFRSLTKKLVRQRILRDQFRI
DGRGVTDIRALSAEVAVVPRAHGSALFERGETQIMGVTTLDMVKMAQQVDSLGPETSKRY
MHHYNFPPYSTGETGRVGSPKRREIGHGALAERALIPVLPSQEEFPYAIRQVSEALGSNG
STSMGSVCASTLSMLNAGVPLKAPVAGIAMGLVSDEVELEDGTRETRYVALTDILGAEDA
FGDMDFKVAGTKDFVTALQLDTKLDGIPSQVLAGALSQAHDARATILEVMAEAIDTPDEM
SEFAPRITTIKVPVDKIGEVIGPKGKMINSITEETGANISIEDDGTVYVGAADGPSAQAA
IDKINAIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGNGKRIAKVEDV
VNVGSKIRVEIADIDNRGKISLVPVEDESAEAAATGENAES
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcactaccgcagtcgagatcgacgaaggggtctacgagaccaccgcaacgctc
gacaacggtgcctacggcacccgcaccatccgtttcgagaccggccgcctcgcacgccag
gccgccggttcggtcgtcgcctatctcgacgacgagaccatgctgctctcggccaccagc
gcctcgaagcagcccaaggaccagttcgacttcttcccgttgacggtggacgtcgaggag
cgcatgtacgccgcgggtcgcatccccggctcgttcttccgtcgtgagggacgcccctcc
accgacgcgatcctgacctgccgtctgatcgaccggccgctgcgcccatccttcgtcgac
ggtctgcgcaacgagatccaggtcgtcgtcacggttctgagcctgaacccgaacgacctc
tacgacgtcgtcgcgatcaacgccgcgtcggcctccacccagctcgccggcctgccgttc
tccggcccggtcggtggcgtgcgtgtcgcgctcatcgtctccgacgacaacaagtcgggc
cagtgggtcgcgttcccgaccgtcgagcagctcgagaacgccgtcttcgacatggtcgtc
gccggtcgcatcgtcggtgggggagacaaccccgacaccgcggacgtcgcgatcatgatg
gtcgaggccgaggcgaccgagaacgtcatcgcgctcgtcgacggtggcgcccaggcgccc
accgagtccgtcgtggccgagggcctcgaggcggcgaagccgttcatcgcccgcctgtgc
atcgcgcagcagcagctcgccgccgcctccgcgaagcccaccggtgagttcccgctgttc
ccgccctaccaggacgacgtctacaccgcggtcgagtccgccgcgtcggagaagctcgcc
gaggcgctcaccatcgccggcaagcaggagcgcgacgaccgcaccgacgagatcaaggtc
gaggtgctcgagcaggtcgctccgaacttcgagggtcgcgagaaggagatcggcgctgcc
ttccgctcattgaccaagaagctcgtgcgccagcgcatcctgcgcgaccagttccgcatc
gacggccgcggtgtcaccgacatccgtgccctctccgccgaggtcgcggtcgttccccgc
gcccacggttcggcgctgttcgagcgcggcgagacccagatcatgggtgtcacgacgctc
gacatggtgaagatggcgcagcaggtcgactcgctcggtcccgagaccagcaagcgctac
atgcaccactacaacttcccgccgtactccaccggtgagaccggtcgtgtcggctcgccg
aagcgtcgcgagatcggccacggtgccctcgcagagcgcgcgctcatcccggttctgccg
agccaggaggagttcccctacgccatccgtcaggtctccgaggccctcggctcgaacggc
tcgacgtccatgggttcggtctgcgcctcgacgctgtcgatgctcaacgccggtgtgccg
ctcaaggccccggtcgccggtatcgccatgggcctggtctccgacgaggtcgagctcgag
gacggcacccgcgagacccgctacgtcgccctgaccgacatcctcggtgcggaggacgcg
ttcggcgacatggacttcaaggtcgccggcacgaaggacttcgtgaccgccctgcagctc
gacaccaagctcgacggtatcccgtcgcaggtcctcgccggtgcgctctcgcaggcccac
gatgcccgcgccacgatcctcgaggtcatggccgaggccatcgacacgcccgacgagatg
agcgagttcgctccgcgaatcaccaccatcaaggtcccggtggacaagatcggtgaggtc
atcggccccaagggcaagatgatcaactcgatcaccgaggagaccggcgccaacatctcc
atcgaagatgacggcaccgtctacgtcggtgcagcggacggcccgtccgcgcaggccgcg
atcgacaagatcaacgccatcgccaacccgcagctgccgaaggtcggcgagcgcttcctc
ggcaccgtggtcaagaccacggcgttcggagcgttcgtctccctgctccccggccgcgac
ggcctggtgcacatcagcaagctcggcaacggcaagcgcatcgccaaggtcgaggacgtc
gtgaacgtcggttcgaagatccgcgtcgagatcgccgacatcgacaaccgcggcaagatc
agcctcgtccccgtcgaggacgagtcggccgaggccgctgcgaccggcgagaacgccgag
tcctga
DBGET
integrated database retrieval system
