Rhodococcus sp. D-6: RBB84_06205
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Entry
RBB84_06205 CDS
T10622
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
rhox Rhodococcus sp. D-6
Pathway
rhox00750
Vitamin B6 metabolism
rhox01100
Metabolic pathways
rhox01240
Biosynthesis of cofactors
Module
rhox_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
RBB84_06205 (pdxS)
Enzymes [BR:
rhox01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
RBB84_06205 (pdxS)
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
NMO
IGPS
Glu_synthase
FMN_dh
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
XBW05520
UniProt:
A0AAU7V003
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All DBs
Position
1305067..1305969
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AA seq
300 aa
AA seq
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MTSPDTAPVTGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRA
QGGVSRMSDPDMIDGIIEAVSIPVMAKARIGHFVEAQVLQALGVDYIDESEVLTPADYEN
HIDKFAFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRRIRQEIRRL
TSLPEDELYVAAKELQAPYDLVVEVARAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFV
GSGIFKSGNPAQRAAAIVKATTFHDDPDVLAKVSRGLGEAMVGINVDEIPQPHRLAERGW
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgaccagccccgacaccgcccccgtcaccggtaccgcccgcgtcaagcgtggcatggcc
gagatgctcaagggcggggtgatcatggacgtggtgacccccgaacaggcgaagatcgcc
gaggacgccggcgcggtggcggtcatggccctcgaacgcgtgcccgccgacatccgcgcg
cagggcggcgtgtcgcgcatgagcgatcccgacatgatcgacggcatcatcgaggccgtc
tcgatccccgtcatggccaaggcgcgcatcggccacttcgtcgaagcgcaggtcctgcag
gccctcggggtcgactacatcgacgagtcggaggtgctcacccccgccgactacgagaac
cacatcgacaagttcgcgttcaccgtgccgttcgtgtgcggcgcaacgaatctcggagag
gcactgcgccgtatcaacgagggcgcggcgatgatccgctccaagggcgaggccggcacc
ggcgacgtctcgaacgccacgacccacatgcgccggatccgccaggagatccggcgtctg
acctcgcttcccgaggacgagctctacgtcgccgccaaggaattgcaggccccctacgac
ctcgtcgtcgaggtcgcccgcgccggcaagctgcccgtcaccctcttcaccgccggtggc
atcgccacccccgccgacgccgcgatgatgatgcagctcggggccgagggcgtgttcgtc
ggatccggaatcttcaagtcgggcaaccccgcccagcgtgcggccgcgatcgtcaaggcc
accaccttccacgacgatcccgacgtgctcgcgaaggtctcgcggggcctcggcgaggcg
atggtcggtatcaacgtcgacgagatcccgcagccccaccggctcgccgaacgcggctgg
tga
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