Rhodococcus sp. D-6: RBB84_10525
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Entry
RBB84_10525 CDS
T10622
Name
(GenBank) D-alanine--D-alanine ligase family protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rhox Rhodococcus sp. D-6
Pathway
rhox00470
D-Amino acid metabolism
rhox00550
Peptidoglycan biosynthesis
rhox01100
Metabolic pathways
rhox01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RBB84_10525
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RBB84_10525
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RBB84_10525
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhox01011
]
RBB84_10525
Enzymes [BR:
rhox01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RBB84_10525
Peptidoglycan biosynthesis and degradation proteins [BR:
rhox01011
]
Precursor biosynthesis
Amino acid ligase
RBB84_10525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
RimK
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
XBW06303
UniProt:
A0AAU7V2N1
LinkDB
All DBs
Position
complement(2233194..2234300)
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AA seq
368 aa
AA seq
DB search
MSMPRTRVAVVFGGRSNEHSVSCISAGSILRNLDPEKYEVVPIGITPEGAWVLGDADPAG
LAAAGRELPVVAGDGSDLVLTADPTRGGDIVALDEGSYGRVLASVDVVFPVLHGAYGEDG
TIQGLLELADIPYVGPGVLASAAGMDKEFTKKLLAAEGLPVGFQIVLRPGTATLTEEQKT
RLGLPVFVKPARGGSSIGISRVADWAAFDDAVAKARQHDPKVIVESAIIGREVECGVLEF
PDGDVRASVVAEIRMPDTSDDHEAFYDFDTKYLDDVCEFDVPAKLDEETSDRIRELAVRA
FRALDCHGLSRVDFFVTEDGPVINEINTMPGFTSISMYPRMWEATGVEYAELLSILVETA
LARGTGLR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgagtatgccccgaacccgggtggccgtcgtcttcggtggtcgcagcaacgaacattcc
gtctcctgcatctcggcagggagcatcctgcgcaacctggatccggagaagtacgaggtc
gtgcccatcggcatcactcccgagggcgcatgggtcctcggcgacgcggacccggccggc
ctcgccgcggccggtcgcgaactgcccgtcgtcgccggcgacggctccgatctcgtcctc
accgcggatccgacccgcggtggcgacatcgtcgccctcgacgagggctcctacggccgg
gtgctcgcctcggtcgacgtggtgttcccggtcctgcacggcgcctacggcgaggacggc
accatccagggtctgctcgaactcgcggacatcccgtacgtcggtcccggggttcttgcc
agcgccgccgggatggacaaggagttcaccaagaaactgctcgcggccgaaggcctgccc
gtcggcttccagatcgtcctgcgtcccggcaccgcgaccctcaccgaggagcagaagacc
cgcctcggcctgcccgtcttcgtcaagcccgcccgcggcggatcgtccatcggcatcagt
cgcgtggccgactgggccgccttcgacgacgccgtcgcgaaggcccggcagcacgacccc
aaggtcatcgtcgagtccgcgatcatcggccgcgaggtggagtgcggcgtgctcgagttc
ccggacggcgacgtccgcgcgagtgtcgtcgccgagatccgcatgcccgacacctccgac
gaccacgaggcgttctacgacttcgacacgaagtacctcgacgacgtctgcgagttcgac
gtcccggccaagctcgacgaggagacctccgaccggatccgcgaactcgcggtccgggcg
ttccgcgccctcgactgccacggcctgtcccgcgtcgacttcttcgtcaccgaggacgga
ccggtgatcaacgagatcaacacgatgcccggattcacctccatctcgatgtacccgcgg
atgtgggaggccaccggcgtggagtacgccgagctgctgtcgatcctggtggagacggcg
ctggcgcggggcaccggcctgcgctga
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