Rhodococcus sp. D-6: RBB84_12775
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Entry
RBB84_12775 CDS
T10622
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhox Rhodococcus sp. D-6
Pathway
rhox03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBB84_12775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhox03400
]
RBB84_12775
Enzymes [BR:
rhox01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RBB84_12775
DNA repair and recombination proteins [BR:
rhox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RBB84_12775
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SNU71_N
Motif
Other DBs
NCBI-ProteinID:
XBW02217
UniProt:
A0AAU7UQR9
LinkDB
All DBs
Position
complement(2709282..2710085)
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AA seq
267 aa
AA seq
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MPLVITTVNVNGVRAAAAKGLVDWLASSAADIVCLQEVRATEKQFHAAIAPALEAGWHCV
GAESSAKGRAGVAILSRVPADAVRVGFDVDEFASAGRYIEADFGDVTVGSLYLPTGEAQT
PKQDEKEHFMKSFATYLAERYAAVTAAGRDMVVCGDWNIAPTERDIKNWKGNVKKSGFLP
EERAWVGDLLETGWRDVVRDLHGDVAGPYSWWSYRGKAFDTDAGWRIDYHLVTPGLAARA
SEARVERAASYDQRWSDHAPVTVTFDR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgcctctcgtgatcaccaccgtgaacgtcaacggcgtgcgtgcagccgcagccaagggt
ctcgtcgactggctcgcctcgtcggccgccgacatcgtgtgcctgcaggaggtgcgggcc
accgagaagcagttccacgccgcgatcgccccggcgctggaggccggatggcactgtgtc
ggcgcagagtcctcggccaagggccgcgccggggtggcgatcctctcgcgtgtcccggcg
gacgccgtccgcgtcggattcgacgtcgacgagttcgcctcggccggccgctacatcgag
gccgacttcggcgacgtgacggtgggaagcctctacctgccgaccggtgaagcacagacg
ccgaagcaggacgagaaggaacacttcatgaagagcttcgcgacctacctcgccgaacgg
tacgccgcggtgacggccgcaggtcgcgacatggtggtgtgcggcgactggaacatcgcc
cctaccgagcgggacatcaagaactggaagggaaacgtcaagaagtccggcttcctgccc
gaggagcgcgcgtgggtcggcgacctcctcgagaccggctggcgcgacgtggtgcgcgac
ctccacggcgacgtcgcgggcccctattcgtggtggtcgtaccgcggcaaggcattcgac
accgacgcaggctggcgcatcgactaccacctcgtgaccccgggcctggcggcccgcgcg
agcgaggcccgcgtcgaacgcgcagcgagctacgaccagcgctggtccgaccatgcaccg
gtgaccgtgaccttcgatcgctga
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