Rhodococcus sp. D-6: RBB84_14060
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Entry
RBB84_14060 CDS
T10622
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
rhox Rhodococcus sp. D-6
Pathway
rhox00860
Porphyrin metabolism
rhox01100
Metabolic pathways
rhox01110
Biosynthesis of secondary metabolites
rhox01120
Microbial metabolism in diverse environments
rhox01240
Biosynthesis of cofactors
Module
rhox_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
rhox_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RBB84_14060 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhox04147
]
RBB84_14060 (hemB)
Enzymes [BR:
rhox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
RBB84_14060 (hemB)
Exosome [BR:
rhox04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RBB84_14060 (hemB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
XBW02455
UniProt:
A0AAU7USN3
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Position
complement(3030590..3031567)
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AA seq
325 aa
AA seq
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MFPDIRPRRLRSTPAIRRLVAETSLEPRHLVLPMFVADGLDEPREIASMPGVYQHTADSL
RKAAAAAVSAGVGGLMLFGVPSPEDKDARGSAASDPGGVLNRALRSLRSELGDSTVIMAD
TCLDEFTDHGHCGVLTDTGVVDNDATLERYAEMAVAQAEAGAHLLGPSGMMDGQIGFIRS
ALDEAGHTEVGQLAYSAKYASAFYGPFRDAVGSSLEGDRRTYQQDPANRRESLHEVDLDL
AEGADMVMVKPAMSYLDVLREVADRSPVPVAAYQISGEYSMITAAAQKGWIDRDAAILES
LVGIRRAGADVVLTYWAAEVAGRLS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtttcccgacatccgtccccgccggctgcgcagcacacccgccatccgacggctcgtg
gcagaaacctccctcgaaccccgccacctcgtgctcccgatgttcgtggccgacggcctc
gacgagccgcgcgagatcgcgtcgatgcccggggtgtaccagcacaccgccgattcgctg
cgcaaggccgcggccgcggccgtgtccgccggtgtcggcggcctgatgctcttcggtgtg
cccagccccgaggacaaggacgcccgtggttccgcggcgagcgatcccggcggtgtgctc
aaccgcgcgctgcggtcgctgcgcagcgaactcggcgactccacggtgatcatggccgac
acctgcctcgacgagttcaccgatcacggccactgcggtgtgctcaccgacaccggcgtc
gtcgacaacgacgcgaccctcgagcgttacgccgagatggccgtcgcgcaggccgaggcc
ggggcgcacctgctcggcccgagcggcatgatggacggccagatcggtttcatccggtcc
gcgctggacgaggccgggcacaccgaggtcggtcagctcgcctactccgcgaaatacgcc
tcggcgttctacggtcccttccgcgacgccgtcggctcgtccctcgagggagatcgccgc
acctaccagcaggatccggcgaaccgtcgcgagtcgctgcacgaggtggacctcgacctc
gccgagggcgccgacatggtgatggtcaagccggcgatgtcgtacctcgacgtgctgcgc
gaggtggccgaccgctcgcccgtcccggtggccgcctaccagatctcgggggagtactcg
atgatcaccgcggccgcgcagaagggctggatcgatcgcgatgcggcgatcctcgaatcg
ctggtcggcatccggcgggccggtgcggacgtcgtcctcacctactgggccgccgaggtc
gcgggtcgtctgtcatga
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