Rhodococcus sp. D-6: RBB84_17820
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Entry
RBB84_17820 CDS
T10622
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rhox Rhodococcus sp. D-6
Pathway
rhox03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RBB84_17820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhox03400
]
RBB84_17820
Enzymes [BR:
rhox01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RBB84_17820
DNA repair and recombination proteins [BR:
rhox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RBB84_17820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
TRIP13_N
Motif
Other DBs
NCBI-ProteinID:
XBW03126
UniProt:
A0AAU7UVI8
LinkDB
All DBs
Position
complement(3838598..3839494)
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AA seq
298 aa
AA seq
DB search
MITTLRIPVAEPVAVGPMLASLRSHTVPGCEHHNSATGTHHRAIRTNGGAAHVAVRFADP
ATPDDGRHGDVRHLEVHVETAGRADVEEIEERVRKWLDLGVDPSVVDAAFEPDPVLGPLV
QTHPGLRVLGTTDWFATAVSTVLGQQVSVAAACTFAGRLVAAFGDGAPGGLRCFPTPHRL
ATVEQSELRAVIGTTQSRARTVAELARAAADGVAPEHLSFAADLLALPGIGPWTVDYLAL
RLGDRDAYPSGDLVLRRALQVESAREAAERAEQWRPWRAYAVMHLWTHATYSPPASSA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccaccctccggatcccggtggccgaacccgttgcggtggggccgatgctcgcg
tcgctgcgaagccacaccgtccccggctgtgaacaccacaacagcgctaccggcacccat
caccgcgcgatccgcacgaacggcggcgccgcgcacgtcgccgtccgcttcgccgaccct
gcgacacccgacgacgggagacacggggatgtgcgacatctcgaggttcatgtcgagacc
gcaggtcgcgcggatgtcgaggagatcgaagagagggtccggaagtggctcgatctcggc
gtcgacccgtccgtcgtggatgcggcattcgagcccgatcccgtgctcgggcctctcgtg
cagacccaccccggtctgcgcgtgctcggcaccaccgactggttcgccaccgccgtgtcg
acagtgctcggacagcaggtgagtgtcgctgcggcatgcacattcgcaggacgactcgtc
gcagccttcggcgacggtgcacccggtgggttgcgatgcttccctacgccgcaccgactc
gcgacggtcgagcagagcgagctgcgtgccgtcatcggcacgacgcagtcgcgcgcccgc
accgtcgccgaactggcccgggccgcagccgacggggtggcgccggagcatctgtcgttc
gcggcagaccttctcgcgcttcccgggatcggaccgtggaccgtcgactatctcgctcta
cgactcggcgaccgcgacgcgtatccgtccggcgacctcgttctccgacgagccctgcag
gtggagagtgcgcgcgaagccgccgagcgcgccgaacaatggcggccgtggcgggcctac
gccgtcatgcatctgtggacacacgccacctactcgccgcccgcatcctcggcgtag
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