Rhodococcus sp. D-6: RBB84_19145
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Entry
RBB84_19145 CDS
T10622
Name
(GenBank) exonuclease domain-containing protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rhox Rhodococcus sp. D-6
Pathway
rhox03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RBB84_19145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhox03019
]
RBB84_19145
03009 Ribosome biogenesis [BR:
rhox03009
]
RBB84_19145
Messenger RNA biogenesis [BR:
rhox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RBB84_19145
Ribosome biogenesis [BR:
rhox03009
]
Eukaryotic type
Pre-60S particles
RNases
RBB84_19145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
XBW03380
UniProt:
A0AAU7UTA8
LinkDB
All DBs
Position
complement(4102510..4103118)
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AA seq
202 aa
AA seq
DB search
MSVDGFVFVDLETTGTRAAEHEILEIGFALYSVDLEPVERFEMLAVTTGTAVLIERVRND
PAYDFITRMHTKNGLFAELEKQLVTLGDKVPTDLSGYESEIVDILARWGVDESTPLCGCS
HRMDREFLDRWLPKVEAMFSYRMIDARSFCEAGAILDAGRTAERLKLVDEYGTANHRVAE
DIHYAANLLRVFHDRAPIPFGA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtggatgggttcgtattcgtcgacctcgaaaccaccggcaccagagcagccgaa
cacgagatcctcgagatcggcttcgcgctgtactccgtggacctcgagccggtcgagcgg
ttcgagatgctcgcggtcaccaccggcaccgcagtcctgatcgagcgggtccgaaacgac
ccggcctacgacttcattacccggatgcacaccaagaacggcctgttcgcggagctcgaa
aagcaactcgtcaccctcggcgacaaggtccctacggacctgtcggggtacgaatccgag
atcgtcgacatcctcgcccggtggggagtggacgaatccaccccgctgtgcgggtgctcg
caccgcatggatcgtgagttcctcgaccggtggttgccgaaggtcgaggcgatgttctcg
taccgcatgatcgacgcgcggtcgttctgcgaagccggagcgatcctcgacgccgggcgt
accgccgaacgcctcaaactcgtcgacgagtacggcaccgcaaaccatcgggtggccgag
gacatccactacgccgcgaacctgctgcgcgtcttccacgatcgggccccgattccattc
ggcgcctga
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