Rhodococcus sp. D-6: RBB84_19635
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Entry
RBB84_19635 CDS
T10622
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rhox Rhodococcus sp. D-6
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhox03000
]
RBB84_19635
Transcription factors [BR:
rhox03000
]
Prokaryotic type
Helix-turn-helix
Other families
RBB84_19635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
GAF
AAA_lid_14
Sigma54_activ_2
AAA_16
AAA
HTH_7
AAA_22
HTH_50
Zeta_toxin
Sigma54_activat
HTH_30
AAA_5
nSTAND3
ig
HTH_28
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
XBW03473
UniProt:
A0AAU7UU05
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All DBs
Position
4200317..4202083
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AA seq
588 aa
AA seq
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MSLDDRTRALLRERELFLEGVDPAGRGIVRKEIAQSWKRSLMYGLEPERSRPTFRSEPQT
AEQLLSVAVPVIESKRGALVDSSSSLTVTDANGWVVARWVEDSRFSRRLDRHDVLPGYSF
AETTVGTNSGGMVLETGRPSLVAGPEHFFEESLQLTCAGAPILHPVTKRLIGTLNLTCRY
SDTNPIMLSWVCEVATQIEQALATSATRREQLLFEAFLADNRDSRHAVICLDEQTIISNA
AAARILGPSDQAILWEHAARSLQSGAGAVVEKTVSLADGAAVGVDVLPVTDGPTTVGALL
RLKLASHPSRSGRSQEPAPKLGDLVGNSPAWRALCHAVADSNPQALLLTGEPGVGKFAVA
RALADESETAIVDALTRSTETDWGTRVTDAVDRDPGLLILRHVEALDPDDLRATANAVAR
ARARQIRVVATTNATAANFPQLVEWFDRTVEVPSLADRAGDLPLLLDAVSRRYSPSGEKV
HWMPDAVQALGRIDWDRNVAGLDALVRELVAGRNRRYIGAQDLPIEHRVQASRRQLQGLE
QVEAKAIMNALRDAGGNKRLAADRLGIARSTLYRKVRSLGIDIDSANF
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgtcactcgacgaccgcacccgtgccttgctgcgtgaacgtgagctctttctcgagggc
gtggacccggcgggccgcggcatcgtgcgcaaagagatcgcacagtcgtggaagcgctcg
ctcatgtacggactcgagcccgaacgatcgcgccccaccttccgctcggagccgcagacc
gccgagcaactgctctccgtggcggtcccggtgatcgaatccaagcgcggcgcactcgtc
gactcgtcgagcagcctgaccgtcaccgacgcgaacggatgggtcgtcgcgcgatgggtg
gaggacagtcgcttctcccgtcgcctggaccggcacgatgtccttcccggatattcgttc
gccgagaccactgtgggcaccaacagcggcgggatggtcctcgagaccggccgcccgtca
cttgtcgccggtcccgagcacttcttcgaagagtccctccaactgacatgcgccggcgcg
ccgattctccatcccgtcaccaagcggcttatcggaacgctcaacctgacctgccgctac
agcgacaccaacccgatcatgttgtcctgggtgtgtgaggtcgccacccagatcgaacag
gcactcgcgacctcggccacccgacgcgaacaactgctgttcgaggccttcctggccgac
aaccgcgacagcaggcatgccgtgatctgtctcgacgaacagaccatcatcagcaacgcc
gcggctgcccggatcctcggtccatctgatcaggcgatcctgtgggagcacgccgcgcga
tcgctgcaatccggtgctggtgcggtagttgagaagacggtctcgctcgccgacggagcg
gccgtcggagtcgacgttctcccggtaaccgacggtcccaccaccgtcggcgccctgctt
cgcctcaaattggccagccatccatcccgcagcggccgatcccaggagcctgcgccgaag
ctcggtgacctcgtcggcaactctccggcctggcgcgcactgtgccacgccgtggccgac
tcgaacccccaggcactgttgctgacaggcgaacccggagtcggcaagtttgctgtggcc
cgtgcactggccgacgagtccgagaccgccatagtcgatgccctgacacggtcgacggag
acagattggggcacccgcgtcaccgacgctgtcgatcgggacccgggcctgctgatcttg
aggcacgtcgaggcgctcgatcccgacgacctccgcgcgacagcaaacgcagtagcccgc
gccagggcccgccagatccgtgtggtggccacgaccaatgccacggccgctaatttcccg
cagttggtcgagtggttcgatcgcaccgtggaggttccgtcgctcgccgaccgggccggg
gacctcccgctgctgctcgacgcggtcagcaggcgctacagcccgtccggggagaaggtc
cactggatgcccgacgcggtccaggccctcggccgaatagattgggaccgcaatgtggcc
ggactcgacgctctcgtgcgcgagctcgtagcgggacgaaaccgtcgatacatcggcgcg
caagacctaccgatcgagcaccgcgtccaagcgtcccgccggcaactgcaggggctcgaa
caggtcgaagcgaaagcaatcatgaacgcgctgcgcgacgccggcggcaacaaacgactc
gccgctgaccggctgggcatcgcacggtcgaccctgtaccgaaaggtccggtcgctgggc
atcgacatcgactccgccaacttctga
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