KEGG   Rhodococcus sp. D-6: RBB84_19890
Entry
RBB84_19890       CDS       T10622                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rhox  Rhodococcus sp. D-6
Pathway
rhox00061  Fatty acid biosynthesis
rhox00071  Fatty acid degradation
rhox01100  Metabolic pathways
rhox01212  Fatty acid metabolism
rhox02024  Quorum sensing
rhox04146  Peroxisome
Module
rhox_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rhox00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    RBB84_19890
   00071 Fatty acid degradation
    RBB84_19890
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    RBB84_19890
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RBB84_19890
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rhox01004]
    RBB84_19890
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhox04147]
    RBB84_19890
Enzymes [BR:rhox01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     RBB84_19890
Lipid biosynthesis proteins [BR:rhox01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   RBB84_19890
Exosome [BR:rhox04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   RBB84_19890
  Exosomal proteins of breast cancer cells
   RBB84_19890
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: XBW03521
UniProt: A0AAU7UV61
LinkDB
Position
complement(4251140..4252843)
AA seq 567 aa
MSDRIESALAQIRALQEKNWPAQVPREFTYPAGTPALAEHLRHWARERPDTVAISFYGRD
ITYAAYDEMSDRFAGWLTSIGVQPGQRVGVHLGNCPQFHIAMLGILKVGAVHVPINPLFK
GHELRHELDDAGVRTLLTQTDLRELVETVRADTPVQTVVTTALGDLLEAAPTVPVPFDPD
DREGSDWADLMAAPRHVGGPSDPDALAALNYTGGTTGMPKGCEHTQRHMAYTAATVTMSG
GRIPGDPDCVSLNFLPVFWIAGEDFGILKPLINGQTVVLMTRWDPTAAAALIAEHKVTDT
VATVDSYLEMMNRPDFDGADFTSLHNPLAVSFVTKLSPEIRRLWREATGGVLREASYGMT
ETHTGDTFTLGFQDEDHDLHAEPVFCGFPVPGTDILIVDEQGVSVPVGESGEIIVRSPSI
LTAYYGRPDATAESIRDGWLYTGDIGRIDERGALHYLARTKEMIKINGMSVFPTEVESLL
MLHAGVESVSVVPRPDPERGQVPVAFVVPADDSVTEEALTAWARENMARYKVPDILLVAE
MPMTATGKIRKGVLLERAAELKPGTES
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgtccgaccgtatcgagtccgcgctggcccagattcgcgccctacaggagaagaactgg
ccggcgcaggtaccgcgtgaattcacctatccggcgggcacaccggcgctcgccgagcac
ctgcgacattgggcgcgcgagcgtccggacaccgtcgccatctctttctacggtcgcgac
atcacctacgccgcctacgacgagatgtccgacagattcgccgggtggctcacgtccatc
ggcgtgcagcccgggcaacgcgtcggagtgcacctgggcaactgcccgcagttccacatc
gcgatgctcgggatcctcaaggtcggcgccgtacatgttccgatcaatccgctgttcaag
ggacacgaactgcgccacgaactcgacgatgccggcgtcaggacgctgctcacgcagacg
gacctgcgcgagctggtcgagacggtgcgtgccgacacgccggtgcagaccgtcgtgaca
acggcactgggagatctccttgaggctgcaccgacagttccggttccgttcgaccccgac
gaccgggaagggtcggattgggccgacctgatggcggcgcctcgccacgtcggcggaccg
agcgaccccgatgcgctcgccgcgctgaactacaccggcggaaccacggggatgcccaaa
ggctgcgagcacacacagcgtcacatggcctacaccgctgcaactgtcacgatgtccggt
gggcggatccccggggatcccgactgtgtgagcctgaacttcctgcccgtcttctggatc
gcgggggaggacttcggcatcctcaaaccgctgatcaacggccaaaccgtggtgctgatg
acgcggtgggatccgacggctgcagcggcattgatcgccgagcacaaggtcaccgacacc
gtcgcaaccgtcgacagttacctcgagatgatgaaccggcccgatttcgacggcgccgac
ttcacgtctttgcacaatcccctcgccgtctccttcgtcaccaagctctcgccggagatc
cggcgcctgtggcgggaggctacgggtggtgtgctgcgcgaagcgtcgtacggcatgacc
gaaacacacaccggtgacaccttcacgctgggttttcaggacgaggaccacgacctgcac
gccgaacccgtgttctgcggatttccggtgccgggtaccgacattctcatcgtcgacgag
cagggcgtgtcggtgcctgttggggaaagtggcgagatcatcgtgcgcagcccctcgatt
ctcacggcctattacggacgtcccgacgcgacagccgagtcgattcgtgatggctggttg
tacaccggcgacatcggtcgtatcgacgagcgcggagcgctgcactacctcgcgcgcacg
aaggaaatgatcaagatcaacggaatgagcgtgtttcccaccgaggtcgagtcgttgctg
atgttgcacgccggagtcgagtcggtgtcggtggtcccgcgtccggaccccgagcgagga
caggttccggtggcgttcgtcgtaccggccgacgacagcgtgaccgaagaagcgctcacg
gcctgggcccgcgagaacatggcccgctacaaggtgccggacatcctgctcgtcgccgag
atgccgatgacggccaccggcaagatccgcaagggcgtgctgctcgagcgcgccgcagaa
ctgaagcccggaacggagtcctga

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