Rhodococcus sp. D-6: RBB84_21550
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Entry
RBB84_21550 CDS
T10622
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rhox Rhodococcus sp. D-6
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhox03400
]
RBB84_21550
Enzymes [BR:
rhox01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RBB84_21550
DNA repair and recombination proteins [BR:
rhox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RBB84_21550
Prokaryotic type
RBB84_21550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
XBW03820
UniProt:
A0AAU7UWK8
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All DBs
Position
complement(4588232..4589587)
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AA seq
451 aa
AA seq
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MARPSIIWFRRDLRLNDLPTLLSATEAADDVLALFVLDDALLRPSGARRRDFLMGCLQAL
DRDLDGRLLVVQGDPMMLVPQVAAEFDAAAVHISSDHGPYGTRRDRAVAEALGDVPLVAT
GSPYAVTPGRITKPDGTAYKVFSAFRRAWNDHGWHTPAATGPDTADWVDPSGCSTRVPIP
EAGDEPTPPLGEAAALERWREFLDDGLERYATDRDRPAYDGTSGLSPYLKFGCIHPRTLL
HDMRNRSDEGAVTFRSELAWRDFYADVLFQRPETARTNYNSDFDAITYDSGPDADALFAA
WCEGRTGFPIVDAGMRQLLAEGVMHNRVRMIVASFLTKDLHLPWWRGARHFMKHLVDGDL
ASNQHNWQWTAGSGTDAAPYFRVFNPTRQGEKFDPTGEYVRRWVPELRSIDGARVHSLPD
GPPDGYPEPVVDHAHERRVALDRYERIRSPR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccccagcatcatctggttccgtcgtgatctccgactgaacgatctgcccacc
ctgctctcggccaccgaggccgccgacgacgtcctcgccctgttcgtcctcgacgacgca
ctgctccgcccgtccggtgcccgccggcgcgacttcctcatgggatgcctgcaagccctc
gaccgggatctcgacgggcgcctgctcgtcgtccagggagacccgatgatgctggtgccg
caagtcgccgccgagttcgatgcggccgcggtccacatcagttccgaccacggtccctac
ggcacgcgacgcgaccgagcggtcgccgaagcgctcggcgacgtcccgctggtggccacc
ggctcgccgtatgccgtcacgccgggccgcataacgaaacccgacggcactgcatacaag
gtgttctcggccttccgccgcgcctggaacgaccacggatggcacacacccgcggcaacc
ggaccggacaccgccgactgggtcgacccgagcggctgctccacacgcgtgccgattccc
gaagccggcgacgaacccacacctcccctcggagaggcggccgcactggagcgatggcgc
gaattcctcgacgacggtctcgagcggtacgccaccgaccgtgaccggccggcctacgac
ggcacgagcggcctgtcgccctatctgaagttcggctgcatccatccgcggaccctgctg
cacgacatgaggaaccggtcggacgagggggccgtcaccttccgcagcgaactggcgtgg
cgcgacttctacgccgacgtcctgttccagcggcccgagaccgcccggaccaactacaac
agcgacttcgacgccatcacctacgattccggacccgacgccgacgccctgttcgccgcg
tggtgcgagggccgcacgggattcccgatcgtggacgccgggatgcggcagctcctcgca
gagggcgtcatgcacaaccgggtgcggatgatcgtcgcgtcgttcctgacgaaggacctg
cacctgccgtggtggcgtggggcgcgacatttcatgaagcatctggtggacggcgatctg
gcctccaaccaacacaattggcagtggacggcgggcagcggcaccgacgccgctccctac
ttccgggtgttcaatccgacccggcagggcgagaagttcgatccgacgggtgaatacgta
cgcagatgggtacccgaactgcggagcatcgacggcgctcgtgtgcacagcctgcccgac
ggccctccggacggatacccggaaccggtcgtcgatcacgcacacgaacgccgcgtcgct
ctggacagatacgagcggattcgctcaccccgatga
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