Rhodococcus sp. D-6: RBB84_22040
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Entry
RBB84_22040 CDS
T10622
Symbol
pks13
Name
(GenBank) polyketide synthase Pks13
KO
K12437
polyketide synthase 13
Organism
rhox Rhodococcus sp. D-6
Pathway
rhox00074
Mycolic acid biosynthesis
rhox01100
Metabolic pathways
rhox01110
Biosynthesis of secondary metabolites
Module
rhox_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
RBB84_22040 (pks13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhox01004
]
RBB84_22040 (pks13)
Lipid biosynthesis proteins [BR:
rhox01004
]
Polyketide synthase
Modular PKS
RBB84_22040 (pks13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
ACP_SdgA_C
Thiolase_N
RhiE-like_linker
CurL-like_PKS_C
Abhydrolase_6
Abhydrolase_3
Motif
Other DBs
NCBI-ProteinID:
XBW06926
LinkDB
All DBs
Position
4685325..4690247
Genome browser
AA seq
1640 aa
AA seq
DB search
MTVAQLREWLRNWIADATGQPVSQISDDRPMEEFGLSSRDAVAMAGEIEELLGVTLNATI
AYQHPTIASLATRIIEGEPEAPAEDDSALYTVGAAAGSKDVAIVGLSTRLPGHVDTPEQM
WELLASGRDGISDLPEGRWSEFENDPAVWESIRNANTRGGYLDDVKGFDAEFFAMSPREV
EMVDPQQRLALELTWEALEHAHIPPSDLKGGSVGVFIGSSASDYMLLAVGDPSAAHPYAL
TGTSTAVIANRVSYFYDFHGPSVTLDTACSSSLVAVHQAVRALRNGEADVALAGGVNMLL
APAGTLGFDELGVMAPDGRIKAFSADADGMIRAEGGGLVVLKRLEDAERDGDDILAVIAG
SAVNQDGRSNGLAAPNPEAQVDVLRRAYRDAQILPSGVDYIEAHGTGTVLGDPIEADALG
RVVGRGREDDKPVLLGSAKTNFGHLESAAGAAGLIKVVLAMQNDQLPPTLNYTAPNPYIP
FDSAHLKVIPEGAKWPRYTGRAVAGVSGFGFGGTNAHVVVREYTGPEGLEASEAEVEVLP
EEIPAAETTEQARELPVLLAVSAAMPSRRRRAAADLADWLETEKGSTTPLADVARTLARR
NHGRSRAIVVASNHGEAIAGLRAVAAGKPAQGVFTADAPASKGAVWVLSGFGAQHRKMAK
QLYLENPVFAAAVDEVDELIYDESGYSMKEKFLDDAQDYDVETAQVGIFTIQIGLAALLR
HHGVEPAAVVGHSMGEAAGAYISGGLSLEDAVRVICSRSRLMGEAESGLTGDDIRLMALV
EYSAAEITDVLPDFPQLEVCVYAAPTHTVIGGPQEQVNAIVARAEAEEKFARVLQTKGAS
HTSQVDPILGELAAELAGIEPHRLKVDLYSSVDQETLYRAGHEGIHDVEYWTKGMRHSVY
FTQAIRQALSDGHTTFVELNANPATLMSVAATAFDAGVQDGQFIQTLKRKEDESLGVLTA
LAQLYVHGQSVDLRTLLPEGGYADLPRTAFLRKPYWVDASIGTSGSGRAPGARVALPDGR
YVWEVQASAVTDAAELVVAAASQVLSDVTLTASIPHTDVPATGTLTTTLTRHPGGASLQV
HANTGDGFTLVHEGVVTSGEPLPAPVAVAAKPAAQAEELPEVVESFGDQWDPNGSQSLDD
RLTLIVAESMGYAPEDLPAEIPLIELGLDSLMAVRIKNRVEYEFDIPQLQLSAVKDASLR
DVAKYLRYAVENREEVAQLAEQQAAEKAAERAAAAEQDDLPEVEDTTAVGEAEQILAEAE
AEAETEAQTAPETAESEQESSGVDVPPRDAAERLTFASWAVVTGKSAKGIFNRLPKLDRD
VAEKLAARLTERAEGEITVDDVLSAPTVEQLAETVRQHLESADRIDGLVRTLRPRAEGSD
TVPVFVFHPAGGSTVAYEPLLRRLPAHTPVFGFERTEGPIDTRAQAYLPLIKEIQGDGPY
VLCGWSLGGVLAYAVARLLREEGKDVRLVGLIDTVMAGEKVEDTPDEIRKRWQRYSAFAK
KTYGVDAPLPYDLLAEAGSDEEQIGILMGLLELSGAQIPGGIIEHQRTSWLDNRAIQTAE
LLPYDGKVVLYMADKYHDDAIDLEPAFGTRQPDGGWGEVVADLEVVHVGGDHLQIVDEPY
ISKVGEDLTRKLADIEASRS
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atgacggttgcgcagctgcgcgaatggctgcgcaactggatcgccgacgcgaccgggcag
ccggtctcccagatctcggacgatcgtccgatggaggagttcgggctgtcctcccgggac
gcggtcgccatggcgggtgagatcgaggaactcctcggtgtcaccctcaacgcgacgatc
gcctaccagcacccgacgatcgcgtcgctcgcgacgcgcatcatcgaaggtgagcccgag
gcacccgccgaggacgactccgccctgtacacggtcggtgccgcggcgggttcgaaggac
gtcgccatcgtcggtctgtccacccgtttgccgggccacgtcgacacccccgaacagatg
tgggagctgctcgcgtccggacgcgacggcatctccgatctgcccgagggccgctggtcg
gagttcgagaacgatcccgccgtgtgggagtcgatccgcaacgccaacaccaggggcggc
tacctcgacgacgtcaagggcttcgacgccgagttcttcgcgatgtcgccgcgcgaagtc
gagatggtcgacccgcaacagcgcctcgcgctggagctgacctgggaagcactcgagcac
gcgcacatcccgccgagcgacctcaagggcggctcggtcggtgtgttcatcggcagctcg
gcgagcgactacatgctcctcgcggtcggcgatccgtccgcagcgcatccctacgcgctc
accggcacctccaccgcggtcatcgcgaaccgcgtgtcgtacttctacgacttccacggc
ccgtcggtcacgctcgacacggcgtgctcgtcgtcgctggtcgccgtgcaccaggccgta
cgtgcgctgcgtaacggcgaagccgacgtcgccctcgccggtggcgtcaacatgctgctg
gccccggccggcaccctcggcttcgacgaactcggcgtcatggcacccgacggccgcatc
aaggcgttctccgccgacgccgacggcatgatccgcgccgagggcgggggtctcgtcgtt
ctcaagcgtctcgaggacgccgagcgcgacggcgacgacatcctcgcggtgatcgccggt
tcggccgtcaaccaggacggccgctccaacggcctggccgctcccaaccccgaagcgcag
gtcgacgtgctgcgccgcgcctaccgcgacgcgcagatcctgccgtccggtgtcgactac
atcgaggcgcacggcaccggcacggtgctcggcgacccgatcgaggccgacgcgctcggc
cgcgtcgtcggtcgtggccgcgaggacgacaagccggtcctgctcggttcggccaagacc
aacttcggtcacctcgagtccgccgcgggtgcggccggtctcatcaaggtcgttctcgcg
atgcagaacgatcagctgcccccgacgctcaactacaccgcgcccaacccgtacatcccg
ttcgacagcgcgcacctgaaggtcatccccgagggcgcgaagtggccgcgctacaccggt
cgcgccgtcgccggtgtgtccggcttcggcttcggtggcacgaacgcgcacgtcgtcgtg
cgcgagtacaccggccccgaggggctcgaagcgtccgaggccgaggtcgaggtcctgccg
gaggagatccccgccgcggagaccaccgagcaggcccgcgagctgcccgtcctgctcgcc
gtctccgctgcgatgccgtcgcgtcgccgccgtgccgccgccgatctcgccgactggctc
gagaccgagaagggcagcacgacgccgctcgccgacgtcgcccgcacgctcgctcgtcgc
aaccacggccggtcccgcgcgatcgtcgtggcgagcaaccacggtgaggcgatcgccggt
ctgcgtgccgtcgccgccggcaagcccgcgcagggcgtgttcaccgccgacgctcccgcc
tccaagggcgcggtgtgggtgctctccggcttcggtgcccagcaccgcaaaatggccaag
cagctgtacctggagaaccctgtcttcgcggcggccgtcgacgaggtcgacgagctgatc
tacgacgagtcgggctactccatgaaggagaagttcctcgacgacgcgcaggactacgac
gtcgagacggcgcaagtcggcatcttcacgatccagatcggtctcgccgcgctgctgcgc
caccacggtgtcgagcccgccgcggtcgtcggccactcgatgggtgaggccgccggcgcc
tacatctcgggcggactctcgctcgaggacgccgtgcgcgtcatctgctcgcgttcgcgt
ctgatgggtgaggccgaatccggcctgaccggcgacgacatccgcctcatggcgctcgtc
gagtacagcgccgccgagatcaccgacgtgctgcccgacttcccgcagctcgaggtctgc
gtctacgcggcgccgacgcacaccgtcatcggtggcccgcaggagcaggtcaacgcgatc
gtcgcgcgtgccgaggccgaggagaagttcgcccgggtcctgcagaccaagggtgcgagc
cacacctcgcaggtcgatccgatcctcggcgagctcgcggccgagctcgccggcatcgaa
ccgcaccgcctgaaggtcgacctgtactcgtcggtcgatcaggagaccctctaccgcgca
ggtcacgagggcatccacgacgtggagtactggaccaagggcatgcgccacagcgtgtac
ttcacgcaggcgatccggcaggcgctgtccgacgggcacaccaccttcgtcgagctcaac
gccaaccccgcgacgctcatgtcggtcgcggcgacggccttcgacgccggtgtgcaggac
ggccagttcatccagacgctcaagcgcaaggaggacgagtccctcggtgtgctgaccgcg
ctcgcgcagttgtacgtgcacgggcagtccgtcgatctgaggacgctgctgccggaaggc
ggctacgccgacctgccgcgcaccgccttcctgcgcaagccgtactgggtcgacgccagc
atcggcacctccggcagcggccgcgcgcccggcgcccgggtcgcactgcccgacggccgc
tacgtgtgggaggtgcaggcatccgccgtcaccgatgcggccgagctggtcgtcgcggcg
gcctcgcaggtgctgtccgatgtcacgctcaccgcgtccatcccgcacaccgacgtcccc
gcgaccggcaccctcaccacgacgctcacccggcacccgggtggcgcgtcactgcaggtg
cacgcgaacaccggcgacggtttcacgctcgtccacgagggtgtcgtcacctccggtgag
ccgctgcccgcgcccgtcgcggtggccgcgaagccggccgcgcaggccgaggagcttccc
gaggtcgtcgagtcgttcggcgaccagtgggatcccaacggatcgcagagcctcgacgac
cgcctgacgctgatcgtcgccgagtccatgggttatgcgcccgaggatctgcccgccgag
atcccgctcatcgagctgggcctcgactcgctcatggcggtccgcatcaagaaccgcgtc
gagtacgagttcgacatcccgcagctgcagctgtcggcggtcaaggacgcgagcctgcgc
gacgtcgcgaagtacctgcgatacgccgtcgagaaccgcgaggaggtcgcgcagctcgcc
gagcagcaggccgccgagaaggcagccgaacgcgccgccgctgcggagcaggacgatctt
cccgaggtcgaggacaccaccgcggtgggcgaggccgagcagattctcgccgaagccgaa
gccgaagccgaaaccgaagcacagaccgcgcccgagacggccgagtccgagcaggagtcg
agcggtgtcgacgtgccgccgcgcgacgccgcggaacggttgaccttcgcctcgtgggcc
gtggtcacgggcaagtcggccaagggcatcttcaaccggttgccgaagctcgaccgcgat
gtcgccgagaagctcgcggcacggctgaccgagcgggccgagggtgagatcaccgtcgac
gacgtgctctccgccccgaccgtcgagcagctcgccgagaccgtccgtcagcatctcgaa
tccgccgatcgcatcgacggactcgtgcgcaccctgcggccccgcgccgagggatcggac
accgtgccggtcttcgtctttcaccccgcgggtggttcgacggtcgcgtacgagccgctg
ctgcgccgcctgcccgcgcacaccccggtgttcggtttcgagcgcaccgagggcccgatc
gacacccgcgcacaggcgtacctgccgctcatcaaggagatccagggcgacggcccgtac
gtgctgtgcggctggtcgctcggcggtgtcctggcctacgcggtggcccgtctgctccgc
gaggagggcaaggacgtgcgtctcgtcggcctcatcgacaccgtcatggccggtgagaag
gtcgaggacacgcccgacgagatccgcaagcgctggcagcgttactcggcgttcgcgaag
aagacctacggggtcgacgcgccgctgccctacgacctgctggccgaggccggcagcgac
gaggagcagatcggcatcctgatgggtctgctcgagctgagcggggcgcagatccccggc
ggcatcatcgagcaccagcgcacgtcgtggctcgacaaccgcgccatccagaccgcggag
ctgctgccctacgacggcaaggtcgtgctgtacatggccgacaagtatcacgacgacgcg
atcgatctcgagccggccttcgggacccggcagcccgacggtgggtggggcgaggtcgtc
gcggatctcgaggtcgtgcacgtcggcggcgatcacctgcagatcgtcgacgagccgtac
atctcgaaggtgggggaagacctgacccgcaagctggccgacatcgaggcctcgaggagc
tga
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