KEGG   Rhodococcus sp. D-6: RBB84_22040
Entry
RBB84_22040       CDS       T10622                                 
Symbol
pks13
Name
(GenBank) polyketide synthase Pks13
  KO
K12437  polyketide synthase 13
Organism
rhox  Rhodococcus sp. D-6
Pathway
rhox00074  Mycolic acid biosynthesis
rhox01100  Metabolic pathways
rhox01110  Biosynthesis of secondary metabolites
Module
rhox_M00887  Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:rhox00001]
 09100 Metabolism
  09103 Lipid metabolism
   00074 Mycolic acid biosynthesis
    RBB84_22040 (pks13)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rhox01004]
    RBB84_22040 (pks13)
Lipid biosynthesis proteins [BR:rhox01004]
 Polyketide synthase
  Modular PKS
   RBB84_22040 (pks13)
SSDB
Motif
Pfam: ketoacyl-synt Acyl_transf_1 Ketoacyl-synt_C PP-binding Thioesterase KAsynt_C_assoc ACP_SdgA_C Thiolase_N RhiE-like_linker CurL-like_PKS_C Abhydrolase_6 Abhydrolase_3
Other DBs
NCBI-ProteinID: XBW06926
LinkDB
Position
4685325..4690247
AA seq 1640 aa
MTVAQLREWLRNWIADATGQPVSQISDDRPMEEFGLSSRDAVAMAGEIEELLGVTLNATI
AYQHPTIASLATRIIEGEPEAPAEDDSALYTVGAAAGSKDVAIVGLSTRLPGHVDTPEQM
WELLASGRDGISDLPEGRWSEFENDPAVWESIRNANTRGGYLDDVKGFDAEFFAMSPREV
EMVDPQQRLALELTWEALEHAHIPPSDLKGGSVGVFIGSSASDYMLLAVGDPSAAHPYAL
TGTSTAVIANRVSYFYDFHGPSVTLDTACSSSLVAVHQAVRALRNGEADVALAGGVNMLL
APAGTLGFDELGVMAPDGRIKAFSADADGMIRAEGGGLVVLKRLEDAERDGDDILAVIAG
SAVNQDGRSNGLAAPNPEAQVDVLRRAYRDAQILPSGVDYIEAHGTGTVLGDPIEADALG
RVVGRGREDDKPVLLGSAKTNFGHLESAAGAAGLIKVVLAMQNDQLPPTLNYTAPNPYIP
FDSAHLKVIPEGAKWPRYTGRAVAGVSGFGFGGTNAHVVVREYTGPEGLEASEAEVEVLP
EEIPAAETTEQARELPVLLAVSAAMPSRRRRAAADLADWLETEKGSTTPLADVARTLARR
NHGRSRAIVVASNHGEAIAGLRAVAAGKPAQGVFTADAPASKGAVWVLSGFGAQHRKMAK
QLYLENPVFAAAVDEVDELIYDESGYSMKEKFLDDAQDYDVETAQVGIFTIQIGLAALLR
HHGVEPAAVVGHSMGEAAGAYISGGLSLEDAVRVICSRSRLMGEAESGLTGDDIRLMALV
EYSAAEITDVLPDFPQLEVCVYAAPTHTVIGGPQEQVNAIVARAEAEEKFARVLQTKGAS
HTSQVDPILGELAAELAGIEPHRLKVDLYSSVDQETLYRAGHEGIHDVEYWTKGMRHSVY
FTQAIRQALSDGHTTFVELNANPATLMSVAATAFDAGVQDGQFIQTLKRKEDESLGVLTA
LAQLYVHGQSVDLRTLLPEGGYADLPRTAFLRKPYWVDASIGTSGSGRAPGARVALPDGR
YVWEVQASAVTDAAELVVAAASQVLSDVTLTASIPHTDVPATGTLTTTLTRHPGGASLQV
HANTGDGFTLVHEGVVTSGEPLPAPVAVAAKPAAQAEELPEVVESFGDQWDPNGSQSLDD
RLTLIVAESMGYAPEDLPAEIPLIELGLDSLMAVRIKNRVEYEFDIPQLQLSAVKDASLR
DVAKYLRYAVENREEVAQLAEQQAAEKAAERAAAAEQDDLPEVEDTTAVGEAEQILAEAE
AEAETEAQTAPETAESEQESSGVDVPPRDAAERLTFASWAVVTGKSAKGIFNRLPKLDRD
VAEKLAARLTERAEGEITVDDVLSAPTVEQLAETVRQHLESADRIDGLVRTLRPRAEGSD
TVPVFVFHPAGGSTVAYEPLLRRLPAHTPVFGFERTEGPIDTRAQAYLPLIKEIQGDGPY
VLCGWSLGGVLAYAVARLLREEGKDVRLVGLIDTVMAGEKVEDTPDEIRKRWQRYSAFAK
KTYGVDAPLPYDLLAEAGSDEEQIGILMGLLELSGAQIPGGIIEHQRTSWLDNRAIQTAE
LLPYDGKVVLYMADKYHDDAIDLEPAFGTRQPDGGWGEVVADLEVVHVGGDHLQIVDEPY
ISKVGEDLTRKLADIEASRS
NT seq 4923 nt   +upstreamnt  +downstreamnt
atgacggttgcgcagctgcgcgaatggctgcgcaactggatcgccgacgcgaccgggcag
ccggtctcccagatctcggacgatcgtccgatggaggagttcgggctgtcctcccgggac
gcggtcgccatggcgggtgagatcgaggaactcctcggtgtcaccctcaacgcgacgatc
gcctaccagcacccgacgatcgcgtcgctcgcgacgcgcatcatcgaaggtgagcccgag
gcacccgccgaggacgactccgccctgtacacggtcggtgccgcggcgggttcgaaggac
gtcgccatcgtcggtctgtccacccgtttgccgggccacgtcgacacccccgaacagatg
tgggagctgctcgcgtccggacgcgacggcatctccgatctgcccgagggccgctggtcg
gagttcgagaacgatcccgccgtgtgggagtcgatccgcaacgccaacaccaggggcggc
tacctcgacgacgtcaagggcttcgacgccgagttcttcgcgatgtcgccgcgcgaagtc
gagatggtcgacccgcaacagcgcctcgcgctggagctgacctgggaagcactcgagcac
gcgcacatcccgccgagcgacctcaagggcggctcggtcggtgtgttcatcggcagctcg
gcgagcgactacatgctcctcgcggtcggcgatccgtccgcagcgcatccctacgcgctc
accggcacctccaccgcggtcatcgcgaaccgcgtgtcgtacttctacgacttccacggc
ccgtcggtcacgctcgacacggcgtgctcgtcgtcgctggtcgccgtgcaccaggccgta
cgtgcgctgcgtaacggcgaagccgacgtcgccctcgccggtggcgtcaacatgctgctg
gccccggccggcaccctcggcttcgacgaactcggcgtcatggcacccgacggccgcatc
aaggcgttctccgccgacgccgacggcatgatccgcgccgagggcgggggtctcgtcgtt
ctcaagcgtctcgaggacgccgagcgcgacggcgacgacatcctcgcggtgatcgccggt
tcggccgtcaaccaggacggccgctccaacggcctggccgctcccaaccccgaagcgcag
gtcgacgtgctgcgccgcgcctaccgcgacgcgcagatcctgccgtccggtgtcgactac
atcgaggcgcacggcaccggcacggtgctcggcgacccgatcgaggccgacgcgctcggc
cgcgtcgtcggtcgtggccgcgaggacgacaagccggtcctgctcggttcggccaagacc
aacttcggtcacctcgagtccgccgcgggtgcggccggtctcatcaaggtcgttctcgcg
atgcagaacgatcagctgcccccgacgctcaactacaccgcgcccaacccgtacatcccg
ttcgacagcgcgcacctgaaggtcatccccgagggcgcgaagtggccgcgctacaccggt
cgcgccgtcgccggtgtgtccggcttcggcttcggtggcacgaacgcgcacgtcgtcgtg
cgcgagtacaccggccccgaggggctcgaagcgtccgaggccgaggtcgaggtcctgccg
gaggagatccccgccgcggagaccaccgagcaggcccgcgagctgcccgtcctgctcgcc
gtctccgctgcgatgccgtcgcgtcgccgccgtgccgccgccgatctcgccgactggctc
gagaccgagaagggcagcacgacgccgctcgccgacgtcgcccgcacgctcgctcgtcgc
aaccacggccggtcccgcgcgatcgtcgtggcgagcaaccacggtgaggcgatcgccggt
ctgcgtgccgtcgccgccggcaagcccgcgcagggcgtgttcaccgccgacgctcccgcc
tccaagggcgcggtgtgggtgctctccggcttcggtgcccagcaccgcaaaatggccaag
cagctgtacctggagaaccctgtcttcgcggcggccgtcgacgaggtcgacgagctgatc
tacgacgagtcgggctactccatgaaggagaagttcctcgacgacgcgcaggactacgac
gtcgagacggcgcaagtcggcatcttcacgatccagatcggtctcgccgcgctgctgcgc
caccacggtgtcgagcccgccgcggtcgtcggccactcgatgggtgaggccgccggcgcc
tacatctcgggcggactctcgctcgaggacgccgtgcgcgtcatctgctcgcgttcgcgt
ctgatgggtgaggccgaatccggcctgaccggcgacgacatccgcctcatggcgctcgtc
gagtacagcgccgccgagatcaccgacgtgctgcccgacttcccgcagctcgaggtctgc
gtctacgcggcgccgacgcacaccgtcatcggtggcccgcaggagcaggtcaacgcgatc
gtcgcgcgtgccgaggccgaggagaagttcgcccgggtcctgcagaccaagggtgcgagc
cacacctcgcaggtcgatccgatcctcggcgagctcgcggccgagctcgccggcatcgaa
ccgcaccgcctgaaggtcgacctgtactcgtcggtcgatcaggagaccctctaccgcgca
ggtcacgagggcatccacgacgtggagtactggaccaagggcatgcgccacagcgtgtac
ttcacgcaggcgatccggcaggcgctgtccgacgggcacaccaccttcgtcgagctcaac
gccaaccccgcgacgctcatgtcggtcgcggcgacggccttcgacgccggtgtgcaggac
ggccagttcatccagacgctcaagcgcaaggaggacgagtccctcggtgtgctgaccgcg
ctcgcgcagttgtacgtgcacgggcagtccgtcgatctgaggacgctgctgccggaaggc
ggctacgccgacctgccgcgcaccgccttcctgcgcaagccgtactgggtcgacgccagc
atcggcacctccggcagcggccgcgcgcccggcgcccgggtcgcactgcccgacggccgc
tacgtgtgggaggtgcaggcatccgccgtcaccgatgcggccgagctggtcgtcgcggcg
gcctcgcaggtgctgtccgatgtcacgctcaccgcgtccatcccgcacaccgacgtcccc
gcgaccggcaccctcaccacgacgctcacccggcacccgggtggcgcgtcactgcaggtg
cacgcgaacaccggcgacggtttcacgctcgtccacgagggtgtcgtcacctccggtgag
ccgctgcccgcgcccgtcgcggtggccgcgaagccggccgcgcaggccgaggagcttccc
gaggtcgtcgagtcgttcggcgaccagtgggatcccaacggatcgcagagcctcgacgac
cgcctgacgctgatcgtcgccgagtccatgggttatgcgcccgaggatctgcccgccgag
atcccgctcatcgagctgggcctcgactcgctcatggcggtccgcatcaagaaccgcgtc
gagtacgagttcgacatcccgcagctgcagctgtcggcggtcaaggacgcgagcctgcgc
gacgtcgcgaagtacctgcgatacgccgtcgagaaccgcgaggaggtcgcgcagctcgcc
gagcagcaggccgccgagaaggcagccgaacgcgccgccgctgcggagcaggacgatctt
cccgaggtcgaggacaccaccgcggtgggcgaggccgagcagattctcgccgaagccgaa
gccgaagccgaaaccgaagcacagaccgcgcccgagacggccgagtccgagcaggagtcg
agcggtgtcgacgtgccgccgcgcgacgccgcggaacggttgaccttcgcctcgtgggcc
gtggtcacgggcaagtcggccaagggcatcttcaaccggttgccgaagctcgaccgcgat
gtcgccgagaagctcgcggcacggctgaccgagcgggccgagggtgagatcaccgtcgac
gacgtgctctccgccccgaccgtcgagcagctcgccgagaccgtccgtcagcatctcgaa
tccgccgatcgcatcgacggactcgtgcgcaccctgcggccccgcgccgagggatcggac
accgtgccggtcttcgtctttcaccccgcgggtggttcgacggtcgcgtacgagccgctg
ctgcgccgcctgcccgcgcacaccccggtgttcggtttcgagcgcaccgagggcccgatc
gacacccgcgcacaggcgtacctgccgctcatcaaggagatccagggcgacggcccgtac
gtgctgtgcggctggtcgctcggcggtgtcctggcctacgcggtggcccgtctgctccgc
gaggagggcaaggacgtgcgtctcgtcggcctcatcgacaccgtcatggccggtgagaag
gtcgaggacacgcccgacgagatccgcaagcgctggcagcgttactcggcgttcgcgaag
aagacctacggggtcgacgcgccgctgccctacgacctgctggccgaggccggcagcgac
gaggagcagatcggcatcctgatgggtctgctcgagctgagcggggcgcagatccccggc
ggcatcatcgagcaccagcgcacgtcgtggctcgacaaccgcgccatccagaccgcggag
ctgctgccctacgacggcaaggtcgtgctgtacatggccgacaagtatcacgacgacgcg
atcgatctcgagccggccttcgggacccggcagcccgacggtgggtggggcgaggtcgtc
gcggatctcgaggtcgtgcacgtcggcggcgatcacctgcagatcgtcgacgagccgtac
atctcgaaggtgggggaagacctgacccgcaagctggccgacatcgaggcctcgaggagc
tga

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