Rhodococcus sp. D-6: RBB84_24260
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Entry
RBB84_24260 CDS
T10622
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
rhox Rhodococcus sp. D-6
Pathway
rhox00230
Purine metabolism
rhox01100
Metabolic pathways
rhox01110
Biosynthesis of secondary metabolites
Module
rhox_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
rhox00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
RBB84_24260 (purD)
Enzymes [BR:
rhox01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
RBB84_24260 (purD)
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Gene cluster
GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
ATP-grasp
ATP-grasp_3
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
XBW04291
UniProt:
A0AAU7UWW4
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Position
5149789..5151042
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AA seq
417 aa
AA seq
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MRVLVIGSGAREHALALALSRDPGVTAVLAAPGNPGIANVAELFPVDAASADNVVALATA
QKADLVVIGPEVPLVLGVADAVRAAGIPCFGPSAAAARIEGSKAFAKDVMAAAGVRTAHS
EVVDTPATLDEALDRFGPTWVVKDDGLAAGKGVVVTTDRAAARDHAAEILENGHPVLLES
FLDGPEVSLFCLVDGETVVPLLPAQDHKRVGEDDTGPNTGGMGAYTPLPWLPEGSVERIV
SEVMEPVAAEMVRRGCGFSGLLYAGLAMGAEGPAVVEFNCRFGDPETQAVLALLESPLGE
ALKAVAAGTLAELPPLRWKDGAAVTVVLAAEYYPSTPRTGDVITGAEGDTVLHAGTKRRE
DGALVSAGGRVLNVIGVGADLASARKAAYDRLADVKLPGGHFRRDIGLAAVEGRISV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgtactcgttatcggctccggtgcccgtgaacatgctcttgctctcgccctgtcc
cgcgaccccggcgtgaccgccgtgctggccgcgccgggcaaccccggtatcgcgaacgtc
gccgagctgttccccgtcgatgcggcctccgccgacaacgtcgtcgccctcgccaccgcg
cagaaggccgatctcgtcgtcataggtcccgaggttccgctcgtcctcggggtcgccgat
gccgtccgcgccgcgggcatcccctgcttcggaccgtccgccgccgccgcacgcatcgag
ggatcgaaggcgttcgcgaaggacgtcatggccgccgccggtgtgcgcaccgcccacagc
gaggtcgtcgacactcccgcgaccctcgacgaggcgctcgaccggttcggaccgacctgg
gtggtcaaggacgacggtctcgctgccggtaagggcgtcgtcgtcaccaccgatcgcgcc
gccgcccgcgaccacgccgccgagatcctcgagaacgggcaccccgtcctgctggagtcc
ttcctcgacggccccgaagtctcgctgttctgcctcgtcgacggcgagacggtcgtgccg
ctgctcccggcgcaggaccacaagcgcgtcggcgaggacgacaccggccccaacaccggt
ggcatgggtgcctacacgccgctgccgtggttgcccgagggcagcgtcgagcggatcgtc
tccgaggtcatggagcccgtcgcggccgagatggtgcgccgcggatgcggtttctccgga
ctgctctacgcgggtctggcgatgggcgccgagggcccggccgtggtcgagttcaactgc
cgtttcggcgacccggagacccaggccgtgctcgctctgctcgagtccccgctgggcgag
gccctgaaggcggtcgccgccggcacgctcgccgagctcccgccgctgcgctggaaggac
ggcgccgcggtgaccgtggtgctcgccgccgagtactacccgtccaccccgcgcaccggc
gatgtgatcaccggcgccgagggcgacacggtgctgcacgccggcacgaagcgtcgcgag
gacggcgcgctggtctccgcaggtgggcgcgtgctcaacgtgatcggtgtgggtgccgat
ctcgcgtccgcgcgcaaggccgcttatgatcggctcgccgacgtcaagctgccgggcggt
cacttccgccgcgacatcggtctggcggccgtcgagggccggatctcggtctag
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