Rhodococcus sp. AH-ZY2: QNA09_09550
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Entry
QNA09_09550 CDS
T10477
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rhoy Rhodococcus sp. AH-ZY2
Pathway
rhoy00300
Lysine biosynthesis
rhoy00470
D-Amino acid metabolism
rhoy01100
Metabolic pathways
rhoy01110
Biosynthesis of secondary metabolites
rhoy01120
Microbial metabolism in diverse environments
rhoy01230
Biosynthesis of amino acids
Module
rhoy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhoy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QNA09_09550 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
QNA09_09550 (dapF)
Enzymes [BR:
rhoy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
QNA09_09550 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Ago_N_2
Motif
Other DBs
NCBI-ProteinID:
WML65005
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Position
1823294..1824160
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AA seq
288 aa
AA seq
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MDFSKGHGTENDFVILPDPEVRISLEPKRVAALCDRRRGLGADGVLRVARAGALVDAGVL
PALPEGTAADDWFMDYRNADGSIAEMCGNGVRVFAHFVTAGGFESRDAFVVGSRAGGKPV
QVHSADATHGDVTVDMGVVRELGESTATIEGRVYRGLGIDVGNPHLACVDPHLTAATLAA
LDLSGPGFDPGFFPQGVNIEFLTPIAAGAVDMRVYERGVGETRSCGTGTVAAAAAALRFD
GADSGTVRVHVPGGAVQVRLEDGRAALRGPSVLVASGTIGDHWWDGLD
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggacttcagcaagggccacggcaccgagaacgacttcgtgatccttcccgatccggag
gtgcggatttccctcgagccgaagcgggtggcggcgttgtgcgaccgtcgtcgtggtctc
ggcgccgacggggtcctgcgggtggcgcgggccggggcgctcgtcgacgcgggggtcctg
cccgcgttgccggaggggacggccgccgacgactggttcatggactatcgcaacgccgac
gggtcgatcgcggagatgtgcggcaacggggtgcgggtgttcgcgcacttcgtcaccgcc
ggcgggttcgaatcgcgtgacgcgttcgtcgtcggcagtcgcgccggcggcaagccggtg
caggtgcacagcgccgacgcgacgcacggcgacgtcaccgtcgacatgggcgtggtgcgc
gagctgggggagtcgaccgcgaccatcgaaggccgggtgtaccgcggtctgggcatcgac
gtcgggaacccgcatctggcctgcgtcgatccgcacctgaccgcggcgaccctggccgcc
ctcgacctgtccggtccgggtttcgaccccggcttctttccccagggcgtcaacatcgag
ttcctcaccccgatcgccgcgggcgcggtggacatgcgggtgtacgagcggggggtgggc
gagacccggtcctgcggcaccggcacggtcgccgccgccgcggcggcgctgcgcttcgac
ggcgccgactccggcaccgtccgggtgcacgtccccggcggggcggtgcaggtgcgcctc
gaggacggccgggccgcgctgcgtggcccctcggtgctggtcgcgtcgggcacgatcggc
gatcactggtgggacggcctggactga
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