KEGG   Rhodococcus sp. AH-ZY2: QNA09_09760
Entry
QNA09_09760       CDS       T10477                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
rhoy  Rhodococcus sp. AH-ZY2
Brite
KEGG Orthology (KO) [BR:rhoy00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    QNA09_09760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rhoy03021]
    QNA09_09760
Transcription machinery [BR:rhoy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     QNA09_09760
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HC2 Extensin_1 HTH_20 CDC27
Other DBs
NCBI-ProteinID: WML65045
LinkDB
Position
complement(1871902..1873260)
AA seq 452 aa
MAATDIHTADSPNESAASADAAESATGTAPATKRPAKKAPAKKAPAKKAAAKKAPAKKAA
AKKTTAKKAAAKKAGKPAGDEFEGEEAALEDIDVAEAELEGAEDVVVEAADADDEPSDKD
KASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAG
LYATYRLQEYADKGEKLPVAQRRDLNWICRDGNRAKNHLLEANLRLVVSLAKRYTGRGMA
FLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVI
NKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLG
DFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVY
GVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1359 nt   +upstreamnt  +downstreamnt
gtggcagccaccgacatccacacggctgattcccccaacgaatcggcagcctccgcggac
gccgcggaatccgcgaccggtaccgcacccgccacgaagcggccggcgaagaaggccccg
gccaagaaggccccggcgaagaaggcggccgccaagaaggccccggcgaagaaggccgcc
gccaagaagacgacggcgaagaaggccgccgccaagaaggcgggcaagccggccggcgac
gagttcgagggcgaggaagccgcgctcgaggacatcgacgtcgccgaggccgaactcgaa
ggcgccgaggacgtggtcgtggaggcggcggacgccgacgacgagcccagcgacaaggac
aaggcgtcgggcgacttcgtctgggacgaagaggagtcggaggcgctgcggcaggcccgc
aaggacgccgagctgaccgcctccgccgactcggtgcgcgcctacctcaagcagatcggc
aaggttgccctgctcaacgccgaggaggaggtcgagctcgccaagcgcatcgaggccggc
ctgtacgcgacctaccggctgcaggagtacgccgacaagggcgagaagctgccggtcgcg
cagcgccgcgacctgaactggatctgccgcgacggcaaccgcgccaagaaccatctgctc
gaggccaacctgcgactcgtcgtctcactcgccaagcgctacaccggccgggggatggcc
ttcctggatctcatccaggagggcaatctcggtctgatccgcgcggtggagaagttcgac
tacaccaagggttacaagttctccacgtacgccacctggtggatccggcaggccatcacc
cgcgccatggcggatcaggcccgcaccatccgcatcccggtgcacatggtcgaggtgatc
aacaagctcggccgcatccagcgtgagctcctccaggacctcgggcgcgagcccactccg
gaggaactggccaaggagatggacatcacgccggagaaggtactggagatccagcagtac
gcccgggagccgatctcgctcgaccagaccatcggcgacgagggcgacagccagctcggc
gacttcatcgaggacagcgaggccgtggtggcggtggacgcggtgtcgttcacgctgctg
caggatcagctgcagtcggtactcgagacactgtccgaacgtgaggccggggtggtccgg
ctgcggttcggcctgaccgacggtcagccgcggaccctcgacgagatcgggcaggtctac
ggggtcacccgcgagcggatccggcagatcgagtcgaagaccatgtcgaagctgcggcac
ccgtcgcggtcgcaggtgctgcgcgactacctcgactga

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