Rhodococcus sp. AH-ZY2: QNA09_09760
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Entry
QNA09_09760 CDS
T10477
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
rhoy Rhodococcus sp. AH-ZY2
Brite
KEGG Orthology (KO) [BR:
rhoy00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QNA09_09760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhoy03021
]
QNA09_09760
Transcription machinery [BR:
rhoy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QNA09_09760
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Extensin_1
HTH_20
CDC27
Motif
Other DBs
NCBI-ProteinID:
WML65045
LinkDB
All DBs
Position
complement(1871902..1873260)
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AA seq
452 aa
AA seq
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MAATDIHTADSPNESAASADAAESATGTAPATKRPAKKAPAKKAPAKKAAAKKAPAKKAA
AKKTTAKKAAAKKAGKPAGDEFEGEEAALEDIDVAEAELEGAEDVVVEAADADDEPSDKD
KASGDFVWDEEESEALRQARKDAELTASADSVRAYLKQIGKVALLNAEEEVELAKRIEAG
LYATYRLQEYADKGEKLPVAQRRDLNWICRDGNRAKNHLLEANLRLVVSLAKRYTGRGMA
FLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVI
NKLGRIQRELLQDLGREPTPEELAKEMDITPEKVLEIQQYAREPISLDQTIGDEGDSQLG
DFIEDSEAVVAVDAVSFTLLQDQLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVY
GVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccaccgacatccacacggctgattcccccaacgaatcggcagcctccgcggac
gccgcggaatccgcgaccggtaccgcacccgccacgaagcggccggcgaagaaggccccg
gccaagaaggccccggcgaagaaggcggccgccaagaaggccccggcgaagaaggccgcc
gccaagaagacgacggcgaagaaggccgccgccaagaaggcgggcaagccggccggcgac
gagttcgagggcgaggaagccgcgctcgaggacatcgacgtcgccgaggccgaactcgaa
ggcgccgaggacgtggtcgtggaggcggcggacgccgacgacgagcccagcgacaaggac
aaggcgtcgggcgacttcgtctgggacgaagaggagtcggaggcgctgcggcaggcccgc
aaggacgccgagctgaccgcctccgccgactcggtgcgcgcctacctcaagcagatcggc
aaggttgccctgctcaacgccgaggaggaggtcgagctcgccaagcgcatcgaggccggc
ctgtacgcgacctaccggctgcaggagtacgccgacaagggcgagaagctgccggtcgcg
cagcgccgcgacctgaactggatctgccgcgacggcaaccgcgccaagaaccatctgctc
gaggccaacctgcgactcgtcgtctcactcgccaagcgctacaccggccgggggatggcc
ttcctggatctcatccaggagggcaatctcggtctgatccgcgcggtggagaagttcgac
tacaccaagggttacaagttctccacgtacgccacctggtggatccggcaggccatcacc
cgcgccatggcggatcaggcccgcaccatccgcatcccggtgcacatggtcgaggtgatc
aacaagctcggccgcatccagcgtgagctcctccaggacctcgggcgcgagcccactccg
gaggaactggccaaggagatggacatcacgccggagaaggtactggagatccagcagtac
gcccgggagccgatctcgctcgaccagaccatcggcgacgagggcgacagccagctcggc
gacttcatcgaggacagcgaggccgtggtggcggtggacgcggtgtcgttcacgctgctg
caggatcagctgcagtcggtactcgagacactgtccgaacgtgaggccggggtggtccgg
ctgcggttcggcctgaccgacggtcagccgcggaccctcgacgagatcgggcaggtctac
ggggtcacccgcgagcggatccggcagatcgagtcgaagaccatgtcgaagctgcggcac
ccgtcgcggtcgcaggtgctgcgcgactacctcgactga
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