Rhodococcus sp. AH-ZY2: QNA09_11415
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Entry
QNA09_11415 CDS
T10477
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
rhoy Rhodococcus sp. AH-ZY2
Brite
KEGG Orthology (KO) [BR:
rhoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rhoy03051
]
QNA09_11415 (pafA)
Enzymes [BR:
rhoy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
QNA09_11415 (pafA)
Proteasome [BR:
rhoy03051
]
Prokaryotic proteasome
Bacterial regulatory particles
QNA09_11415 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
DUF244
Motif
Other DBs
NCBI-ProteinID:
WML65343
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Position
2232624..2233982
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AA seq
452 aa
AA seq
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MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDDLLQLVEHDHAGERVLEELLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSY
GCHENYLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMSETTTMLKVGSASLVLEMIEAGVAF
RDFALDNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYHGRAVEYLRTREPDPHVE
QVVDLWGRVLDAVESQDFAKVETEVDWVIKRKLFQRYQDRYDLELSDPKIAQLDLAYHDI
KRGRGVFDLLQRKGLATRLTDDESVDAAVHTPPQTTRAKLRGDFIAAAQDAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgacgaatcatgggcatcgagacggagttcggcgtcacgtgcaccttccacggg
caccggcggctgagcccggacgaggtcgcccggtatctgttccgccgggtggtgtcctgg
gggcgcagctcgaacgtgttcctccgcaacggggcgcgcctgtacctggacgtcgggtcg
cacccggagtacgccacggccgaatgcgacgaccttctccagctcgtcgagcacgatcac
gccggcgagcgggtgctcgaggaactgctgatcgacgccgagcagcgcctcgccgaggag
ggcatcggcggggacatctacctgttcaagaacaacaccgactcggccggcaactcctac
ggctgccacgagaactacctcgtggtgcgggcgggggagttctcccgcatctcggacgtg
ctgctgccgttcctggtgacgcggcagttgatctgcggcgccgggaaggtgctgcagacc
cccaaggcggccacgttctgcctgtcgcagcgcgccgagcacatctgggagggcgtgtcg
tcggcgaccacccggtcccggccgatcatcaacacccgcgacgagccgcacgccgacgcc
gagaagtaccggcggttgcacgtgatcgtcggggactcgaacatgtccgagaccaccacg
atgctcaaggtcggctccgcgtcgctggtgctcgagatgatcgaggccggggtggcgttc
cgcgacttcgcgctcgacaatccgatccgggccatccgggaggtcagccacgacctgacc
gggcgcaggccggtgcgcctggccggtggccggcaggccagcgccctcgacatccagcgc
gagtatcacggccgggcggtggagtacctgcgcacccgcgaacccgatccgcacgtcgag
caggtggtggatctgtggggccgggtgctcgacgcggtcgagtcgcaggacttcgcgaag
gtcgaaaccgaggtcgactgggtgatcaagcgcaagctgttccagcgctaccaggaccgc
tacgacctggagctgtccgacccgaagatcgcccagctggacctggcgtaccacgacatc
aaacgcgggcgcggggtgttcgacctgcttcagcgcaagggcctggccacgcggctgacc
gacgacgagtccgtcgacgcggccgtgcacaccccgccgcagaccacccgggcgaagctg
cgcggcgacttcatcgccgccgcgcaggacgcgggccgcgacttcaccgtggactgggtg
cacctcaagctcaacgatcaggcgcagcgcacggtcctgtgcaaggacccgttccgctcg
gtcgacgaacgcgtcgaacggctcatcgcctcgatgtag
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