Rhodococcus sp. AH-ZY2: QNA09_13215
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Entry
QNA09_13215 CDS
T10477
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhoy Rhodococcus sp. AH-ZY2
Pathway
rhoy03030
DNA replication
rhoy03430
Mismatch repair
rhoy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QNA09_13215
03430 Mismatch repair
QNA09_13215
03440 Homologous recombination
QNA09_13215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoy03032
]
QNA09_13215
03400 DNA repair and recombination proteins [BR:
rhoy03400
]
QNA09_13215
Enzymes [BR:
rhoy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QNA09_13215
DNA replication proteins [BR:
rhoy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QNA09_13215
DNA repair and recombination proteins [BR:
rhoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QNA09_13215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WML65950
LinkDB
All DBs
Position
2661407..2663152
Genome browser
AA seq
581 aa
AA seq
DB search
MQLGFDELDTPLRETLFVVVDLETTGGSSTDDAITEIGAVKIRGGEVLGEFATLVDPGRS
IPPNIVQLTGITTAMVRSAPRIEQVLPSFLEFAAGAVLVAHNAGFDVGFLRAAASRAEVA
WPRFTVLCTVKLARRVLGRDEAPSVRLSALAELFRVSTTPTHRALDDARATVDVLHALIE
RVGNQGVHSLTELRDYLPAVTAEQRAKRSLAAHLPRRPGVYLFRGPSDEVLYIGTAVDLR
RRVRNYFTGSETRPRLREMVALATRIDHVECAHALEAGVRELRLLAAHAPPYNRRSKFPA
RGWWITLTDEAFPRLSVVRTPAAAPPHPVGGPTVDAVGPFSSRADAAAVATTVAEFCRLR
TCTRRIPRTKRHGEHCPPDAVGACAAAVAGLQTPAEYAQQVDLARALLRGDDDEPLHRMR
RRVEHLGAAELFESAARLRDRTADAVLALRRTQRLAALAAVDELVAARRRVEGGWEFAVI
RAGRLAGAGVAPRGVPPMPVVDAIVAAAETVRPTTAPLRGALVEELGLLVRWLHDDGVRI
VRTSQGWSEPLRGAGAWAQWGELARTARAGAEPVPVAHPLR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
gtgcagctcgggttcgacgaactggacacgccgttgcgggagacgttgttcgtcgtcgtc
gacctcgagaccaccggcggcagttccacggacgacgccatcacggaaatcggcgcggtc
aagatccgtggcggcgaggttctcggcgagttcgccacgctcgtcgacccgggccgttcg
atcccgccgaacatcgtccagctcaccggcatcacgaccgccatggtgcgttccgcgccc
cggatcgagcaggttctgccctcgttcctcgagttcgccgccggggccgtgctcgtcgcg
cacaacgcgggcttcgacgtcgggttcctgcgggccgcagcgtcccgcgccgaggtcgcg
tggccccggttcacggtgctgtgcacggtcaagctcgcccgccgcgtgctcggccgggac
gaggccccgtccgtgcgactgtcggcgctggccgaattgttccgtgtgtccaccacgccc
acgcaccgtgctctcgacgatgcccgcgccaccgtcgacgtcctgcacgcgctcatcgag
cgcgtcgggaaccagggcgtccacagcctcaccgaactgcgggactatctgccggcggtc
accgcggagcaacgcgccaagcggtccctcgcggcacacctgccgcgacggcccggtgtg
tacctgttccgcgggccctccgacgaggtgctgtacatcggtacggccgtcgacctgcgc
cgccgcgtgcgcaactacttcaccggttccgagacccggccccggctgagggagatggtg
gcgctcgccacccggatcgaccacgtggaatgcgcccatgccctcgaggcgggggtgcgg
gagttgaggctgctcgccgcgcacgccccgccctacaaccgccgctccaagttccccgcc
cggggctggtggatcaccctcaccgacgaggcgttcccccggctgtccgtcgtgcggaca
cccgccgcggctcccccgcatccggtcggcggccccaccgtcgacgccgtcggcccgttc
tcgtcgcgggccgacgccgccgccgtcgccaccaccgtcgccgagttctgccgccttcgg
acctgcacccgccggatcccccgcacgaagcgccacggcgagcactgcccgccggacgcc
gtcggagcctgcgctgccgcagtagccggactgcagacacccgccgagtacgcgcagcag
gtggatctcgcccgcgccctgcttcgcggcgacgacgacgagccgctgcatcggatgcgc
cggcgtgtcgaacacctcggcgctgccgaactgttcgagagcgcggcccggttgcgggac
cggacggccgacgccgtgctcgcactgcgccggacgcagcgcctggccgcgctcgcggcg
gtggacgagctggtcgccgcccgccggcgcgtcgagggcggctgggagttcgcggtgatc
cgggcgggccggctcgcgggggcgggagtcgctccgcgcggcgtcccgccgatgcccgtg
gtcgacgcgatcgtcgcggcagccgagacggtgcggccgacgacggcgccgttgcgcggc
gcgctcgtcgaggaactcggcctgctggtccgctggctccacgacgacggggtccgcatc
gtccgaacctcccagggctggtccgagccgcttcgcggcgccggcgcctgggcgcagtgg
ggtgaactcgcccggacggcacgtgccggggccgagccggtcccggtcgcgcacccccta
cgctga
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