Rhodococcus sp. AH-ZY2: QNA09_13840
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Entry
QNA09_13840 CDS
T10477
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rhoy Rhodococcus sp. AH-ZY2
Pathway
rhoy03030
DNA replication
rhoy03430
Mismatch repair
rhoy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QNA09_13840 (holA)
03430 Mismatch repair
QNA09_13840 (holA)
03440 Homologous recombination
QNA09_13840 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoy03032
]
QNA09_13840 (holA)
03400 DNA repair and recombination proteins [BR:
rhoy03400
]
QNA09_13840 (holA)
Enzymes [BR:
rhoy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QNA09_13840 (holA)
DNA replication proteins [BR:
rhoy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QNA09_13840 (holA)
DNA repair and recombination proteins [BR:
rhoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QNA09_13840 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
WML65780
LinkDB
All DBs
Position
complement(2790099..2791067)
Genome browser
AA seq
322 aa
AA seq
DB search
MTNPQLHLVLGDEDLLVERAVARIVGAVRARTGSGPELTVSRLRAGDAGAAELAELLSPS
LFAEDRVVVLESAAEAGKDAVALIVDAATDPPEGVTLVVLHSGGGRAKAMVGELQKCGAE
THECARITKPAERVDFVRAEFRTAGVRVAPEVVQAVIDAVGSDLRELAAACSQLVADTGG
KIDAAAVQRYYSGKAEVTGFEVAEKAVAGDEAGALESLRWATHRGVAHVLLADALADAVH
TIARVGSAGRGDPFKMASELGMPPWKVKKAQGQARTWDPGSIGAALRVVADLNADVKGAA
ADADYAVERAVRRVAELAGRTR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacccgcagttgcatctcgtgctcggtgacgaagacctcctcgtcgaacgggcc
gtcgcgcggatcgtcggtgccgtccgggcccggacggggtctggtcccgagctcaccgtc
tcgcggctgcgcgccggcgacgccggcgccgccgaactcgccgagctgctgagcccgtcg
ctgttcgccgaggaccgggtggtcgtcctcgaatccgccgcggaggccggcaaggacgcc
gtcgcactgatcgtcgacgcggcgaccgacccgcccgagggggtgaccctcgtcgtcctg
cacagcggcggtggccgcgcgaaagccatggtgggcgaactgcagaagtgcggcgccgag
acccacgagtgcgcccggatcaccaagccggccgagcgcgtggacttcgtgcgggccgag
ttccgcaccgccggtgttcgagtagcaccggaggtcgtgcaggccgtgatcgacgccgtg
ggctccgacctgcgggagctggcggcggcgtgcagtcagctcgtcgccgacacgggcggc
aagatcgatgctgccgccgtgcagcgttactactccggcaaggccgaggtcacggggttc
gaggtggccgagaaggccgtcgcgggtgacgaggccggggcgctggaatcgctgcggtgg
gcgacgcatcgtggtgtcgcgcacgtcctgctcgccgacgccctcgccgatgccgtccac
acgatcgcacgagtcggttcggccgggcgcggcgacccgttcaagatggcctcggaactc
gggatgccgccctggaaggtgaagaaggcccaggggcaggcacgcacgtgggatcccgga
tcgatcggggcggcgctgcgagtggtggccgatctcaatgccgacgtcaagggcgcggcc
gcggacgccgactacgcggtcgagcgcgccgtgcgccgcgtcgcggagctggccggccgg
acccgttag
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