KEGG   Rhodococcus sp. AH-ZY2: QNA09_13925
Entry
QNA09_13925       CDS       T10477                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
rhoy  Rhodococcus sp. AH-ZY2
Brite
KEGG Orthology (KO) [BR:rhoy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhoy03032]
    QNA09_13925
   03036 Chromosome and associated proteins [BR:rhoy03036]
    QNA09_13925
   03400 DNA repair and recombination proteins [BR:rhoy03400]
    QNA09_13925
DNA replication proteins [BR:rhoy03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    QNA09_13925
Chromosome and associated proteins [BR:rhoy03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    QNA09_13925
DNA repair and recombination proteins [BR:rhoy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      QNA09_13925
SSDB
Motif
Pfam: Bac_DNA_binding HC2 HU-HIG HU-CCDC81_euk_2 HU-CCDC81_euk_1 HU-CCDC81_bac_2 Saf4_Yju2
Other DBs
NCBI-ProteinID: WML65796
UniProt: A0AA51QQW0
LinkDB
Position
complement(2808200..2808874)
AA seq 224 aa
MNKAELIDVLTEKLGSDRRTATAAVEHMVDAIVRAVHSGKSVTITGFGVFEQRRRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAVIAGSQKLPATGPAVKRGAAAAAKKTAAAKKTA
AKKTAAAKKTAAKAAPAKKTTAAKAPAKTTAAKKTTAAKKTTAAKAPAKTTAAKKTTAAK
KTTAAKAPAKTTAAKKTTAAKKTTAAKKTTAAKKAPARKAAAKK
NT seq 675 nt   +upstreamnt  +downstreamnt
atgaacaaggcagagctgatcgatgttctgaccgagaaactcggttcggacaggcgcaca
gcaacggcggccgtggagcacatggtcgacgcgatcgtgcgtgcagtgcactcgggcaag
agcgtcaccatcaccggattcggtgtcttcgagcagcgccgccgcgcagcccgggtcgcg
cgcaacccgcgtacgggtgagaccgtgaaggtcaagccgacgtcggtgccggcgttccgc
cccggcgctcagttcaaggcggtcatcgccggttcgcagaagctccccgcgaccggtccg
gccgtcaagcgcggcgcggctgcggcggccaagaagaccgcggcggcgaagaagaccgcc
gccaagaagaccgcggcggcgaagaagaccgccgccaaggccgctccggcgaagaagacc
acggcggccaaggctccggccaagaccaccgcggcgaagaagaccaccgcggccaagaag
accacggcggccaaggctccggccaagaccaccgcggccaagaagaccaccgcggccaag
aagaccacggcggccaaggctccggccaagaccaccgcggccaagaagaccaccgcggcc
aagaagaccaccgcggcgaagaagaccacggcggccaagaaggcaccggcccgcaaggcc
gccgccaagaagtag

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