Rhodococcus sp. AH-ZY2: QNA09_15960
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Entry
QNA09_15960 CDS
T10477
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rhoy Rhodococcus sp. AH-ZY2
Brite
KEGG Orthology (KO) [BR:
rhoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhoy03000
]
QNA09_15960
Transcription factors [BR:
rhoy03000
]
Prokaryotic type
Helix-turn-helix
Other families
QNA09_15960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
GAF
AAA_lid_14
HTH_28
HTH_30
AAA_22
AAA_16
HTH_23
Sigma54_activ_2
HTH_22
HTH_50
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
WML61368
LinkDB
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Position
complement(3296249..3297895)
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AA seq
548 aa
AA seq
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MNGLRPEIALSWKRSQLSGIDPGRLPEPTLLGPSDAAGRLLDAARPVLDELRTQLAGTGC
CILLVDRDCRIVARLFDSAPMQRAMEEIGVVPGAALSEDTYGTNALGTPFEVRQSLVVHG
EEHYLESLKDFSCYGHPLVHPVTRRIEGILDITAAGKTANPLFAPFLARAARDIEARLLE
GARESDRRVVDAFQRAAQQRGVAVAAMGEDIMLTNKAAVELLLPADHAALRAIAVDLPAG
ESRTMDFALSAGGSTRLRIDRIPGIGSGALFLLDASGAREPVPRSDVAQDATTRLRRRLG
RLRDGAGGVAIVGEPGSGRTWAARELVREAGTFLDAARIVGEGEREWSARLLTVAAAATD
RGFVVVEHVHLAPDPVPALLSSMLSDPAAPRLVLTADPVDGIRPPVRELLARCPGQVRVP
ALRQRIRELGDLAAALAQELGRPDLRLGPSALTALSERSWPGNLAELRAVLAAVPVRESP
LPVRREDLPVDYRATSRVSRLGGRERAEREAIIEALRESGGNKVHAAAQLGISRTTLYSR
IRALGIAG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggtctgcggccggagatcgcgctgtcctggaagcgctcacagctgagcgggata
gacccgggacggcttcccgaaccgaccctgctgggcccctcggacgcggccgggcggctg
ctcgacgccgcccggccggtactcgacgagctgcgcacccagctcgccggcacgggctgc
tgcatcctcctcgtggaccgcgactgccggatcgtggcccggttgttcgactcggcaccc
atgcaacgggccatggaggagatcggcgtggtccccggcgccgccctgagcgaggacacc
tacggcaccaatgcactcggcaccccgttcgaggtgcggcagagcctcgtggtgcacggc
gaagagcactacctcgagtccctcaaggacttcagctgctacgggcatcccctcgtgcat
ccggtcacccgtcgcatcgaaggcatcctcgacatcaccgccgccggcaagaccgccaat
ccgctgttcgcgccgttcctcgcccgggcggcccgcgacatcgaggcacggctgctcgag
ggcgcccgcgagtccgaccggcgggtcgtcgacgcgttccagcgggccgcgcagcagcgc
ggcgtcgcggtcgcggccatgggcgaggacatcatgctcaccaacaaggccgccgtcgaa
ctgctcctgcccgccgatcacgctgccctgcgcgcgatcgcggtcgatctgccggcgggg
gagtcccgcaccatggacttcgcgctgtccgccggcggcagcacccgattgcggatcgac
cgcatcccgggcatcggcagcggtgcgttgttcctgctcgacgcctccggggcacgcgaa
cccgtgccccggagcgacgtcgcgcaggatgcgacgacgcggctacggcggcggctcggg
cggctgcgcgacggtgccggtggcgtggcgatcgtcggcgagcccggcagtgggcgaacc
tgggcggcaagggaactcgtccgtgaggcgggcacgttcctggatgccgcccggatcgtc
ggtgagggtgaacgcgaatggtcggcccggttgctcacggtcgcggccgccgcgacggac
cgcggcttcgtggtcgtcgaacacgtgcacctggcgccggacccggtgccggcgctgctc
tcgtcgatgctctccgacccggccgcaccgcggctcgtgctcacggccgaccccgtcgac
ggcatccggccgccggtgcgggagctgttggcacgctgccccggtcaggtccgggtcccg
gccctgcggcaacggatccgggaactcggtgacctggccgccgcgctcgcgcaggaactc
ggccgaccggatctgcgcctgggcccgagtgccctgacggccttgtcggaacgttcgtgg
cccggcaacctcgccgaactgcgggcggtgctcgccgccgtcccggtgcgggagtccccg
ctgccggtgcgacgggaggatctgccggtcgactaccgggcgacgagccgggtctcccgc
ctgggagggcgcgagcgcgccgagcgggaggccatcatcgaggcgctgcgtgagagcggc
ggcaacaaggtgcacgccgcggcgcagctcggtatcagccgcaccacgctctacagccgg
atccgcgcgctcggcatcgcgggctga
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