Rhodococcus sp. AH-ZY2: QNA09_17315
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Entry
QNA09_17315 CDS
T10477
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhoy Rhodococcus sp. AH-ZY2
Brite
KEGG Orthology (KO) [BR:
rhoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoy03032
]
QNA09_17315
03400 DNA repair and recombination proteins [BR:
rhoy03400
]
QNA09_17315
Enzymes [BR:
rhoy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QNA09_17315
DNA replication proteins [BR:
rhoy03032
]
Prokaryotic type
DNA Topoisomerases
QNA09_17315
DNA repair and recombination proteins [BR:
rhoy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QNA09_17315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Top1B_N_bact
Topoisom_I
Motif
Other DBs
NCBI-ProteinID:
WML61609
UniProt:
A0AA51LT33
LinkDB
All DBs
Position
complement(3565566..3566573)
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AA seq
335 aa
AA seq
DB search
MRVRRSNPFGPGIRRVRRGRGFTYQDADGNRVTDEAVLARIDELVIPPAWRKVWICPHPD
GHIQAVGIDAAGRRQYLYHQRWREERDEEKHDRVLAMAARLPAWRDQVQADLTERGVGRR
RAEAVALRLLDRAVFRVGGEEYAAENGTYGVATLLRSHVRLRDTALTFDYPAKGGIRRVV
TVDDADLATAVRALRRVRRGPGRLLVYRDGDAIRELHADDVNARFKELAGEDCSAKDLRT
WGATVLAAAAFAEHDVPGSRRGRARVEAAVMRAVSEELGNTPAVARASYVDPRVVRAWAE
GRTIRAALRRAGKCGDPDESRAVVERAVIRLLRRS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtgcggcggagcaacccgttcggtcccggcatccggcgggtgcggcgcgggcgg
ggcttcacctatcaggacgccgacggcaatcgtgtgaccgacgaggccgtcctcgcccgt
atcgacgaactcgtcatccctccggcgtggcgcaaggtgtggatctgtccccaccccgac
gggcacatccaggccgtgggcatcgacgccgccggtcggcgccagtacctgtaccaccag
cggtggcgcgaggagcgtgacgaggagaagcacgaccgggtcctggcgatggcggcccgg
ctgccggcctggcgggaccaggtgcaggccgacctgaccgagcggggggtcgggcggcgc
cgggccgaggcggtggcgctgcggttgctggaccgggccgtgttccgggtgggtggggag
gagtacgcggccgagaacggaacctacggggtcgcgacgttgctgcgcagccacgtgcgg
ctgcgtgataccgccctgacgttcgactacccggccaagggcggaatccggcgggtcgtc
acggtcgacgacgccgacctggcgacggctgtccgggcgctgcgccgggtccgcaggggg
cccggccggctgctggtctaccgcgacggtgacgcgatccgcgagttgcacgcggacgac
gtcaacgcccggttcaaggagctcgccggtgaggactgcagtgcgaaggatctgcgcacg
tggggtgcgacggtgctggccgccgcggccttcgccgagcacgacgtgcctgggagtcgg
cgcggccgggcgcgggtcgaggcggccgtgatgcgggcggtctcggaggagctcggcaac
acccccgccgtggcacgggcctcgtacgtcgacccgcgcgtggtgcgggcctgggcggag
ggccgcacgatccgtgccgcactgcggcgagccggaaagtgcggcgatccggacgaatcc
cgggccgtcgtcgagcgcgccgtgatccggctgctgcgccggtcctga
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