KEGG   Rhodococcus sp. AH-ZY2: QNA09_17485
Entry
QNA09_17485       CDS       T10477                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhoy  Rhodococcus sp. AH-ZY2
Pathway
rhoy00010  Glycolysis / Gluconeogenesis
rhoy00020  Citrate cycle (TCA cycle)
rhoy00260  Glycine, serine and threonine metabolism
rhoy00280  Valine, leucine and isoleucine degradation
rhoy00310  Lysine degradation
rhoy00380  Tryptophan metabolism
rhoy00620  Pyruvate metabolism
rhoy00630  Glyoxylate and dicarboxylate metabolism
rhoy00640  Propanoate metabolism
rhoy00670  One carbon pool by folate
rhoy00785  Lipoic acid metabolism
rhoy01100  Metabolic pathways
rhoy01110  Biosynthesis of secondary metabolites
rhoy01120  Microbial metabolism in diverse environments
rhoy01200  Carbon metabolism
rhoy01210  2-Oxocarboxylic acid metabolism
rhoy01240  Biosynthesis of cofactors
Module
rhoy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhoy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhoy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhoy_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhoy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    QNA09_17485 (lpdA)
   00020 Citrate cycle (TCA cycle)
    QNA09_17485 (lpdA)
   00620 Pyruvate metabolism
    QNA09_17485 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    QNA09_17485 (lpdA)
   00640 Propanoate metabolism
    QNA09_17485 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    QNA09_17485 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    QNA09_17485 (lpdA)
   00310 Lysine degradation
    QNA09_17485 (lpdA)
   00380 Tryptophan metabolism
    QNA09_17485 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    QNA09_17485 (lpdA)
   00670 One carbon pool by folate
    QNA09_17485 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhoy04147]
    QNA09_17485 (lpdA)
Enzymes [BR:rhoy01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     QNA09_17485 (lpdA)
Exosome [BR:rhoy04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   QNA09_17485 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_3 DAO HI0933_like FAD_oxidored NAD_binding_8 FAD_binding_2 GIDA Thi4 3HCDH_N ApbA AlaDh_PNT_C Amino_oxidase 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: WML61643
UniProt: A0AA51QK75
LinkDB
Position
complement(3600478..3601881)
AA seq 467 aa
MTSHYDVVVLGAGPGGYVAAIRAAQLGLSTAIIEKKYWGGVCLNVGCIPSKALLRNAELA
HLFTKEAKTFGMSGDVSFDFGAALDRSRKVADGRVKGVHFLMKKNKITEYDGAGSFVDAN
TISVELNKGGTETVTFDNAIIATGSVTKLLPGTQLSENVVTYEEQILTRDLPGSILIVGA
GAIGMEFGYVLKNYGVDVTIVEFLDRALPNEDADISKEIAKAYKKLGVKIMTGAAVQSID
DDGNKVTVAIKDNKSGNVESVVVDKVMQSVGFAPRVEGFGLENTGVELTDRGAIAIDDVM
RTNVPHIYAIGDVTAKLMLAHVAEAMGVVAAETIGGAETLTFDDYRMMPRATFCQPQVAS
FGLTEQQARDEGYDVKVATFPFTANGKAHGLGDPNGFVKLIADNKHGELLGGHLIGPDVS
ELLPELTLAQKWDLTVNELARNVHTHPTLSEALQEAIHGLAGHMINF
NT seq 1404 nt   +upstreamnt  +downstreamnt
gtgacctcacactatgacgtcgttgtcctcggagccggtcccggtgggtacgtcgctgct
atccgcgcggcacagctgggcctgagcaccgccatcatcgagaagaagtactggggtggt
gtctgcctgaacgtgggctgcattccctccaaggcgcttctccgcaatgccgaactggcg
catctcttcacgaaagaggccaagacgttcggcatgtccggggacgtgtccttcgacttc
ggtgcggccctggaccgcagccgcaaggtcgcggacggccgcgtcaagggcgtgcacttc
ctgatgaagaagaacaagatcaccgaatacgacggtgccggctcgttcgtcgacgccaac
accatctcggtcgagctcaacaagggcgggaccgagacggtgaccttcgacaacgcgatc
atcgcgaccgggtcggtgaccaagctgctgcccggcacgcagctgagcgagaacgtcgtc
acctacgaggagcagatcctcacccgcgacctgccgggctcgatcctgatcgtcggcgcc
ggtgccatcggcatggagttcggctacgtgctgaagaactacggcgtggacgtcaccatc
gtcgagttcctcgaccgggcgctgcccaacgaggacgccgacatctccaaggagatcgcg
aaggcgtacaagaagctcggcgtgaagatcatgaccggggccgcggtgcagtccatcgac
gacgacggcaacaaggtgaccgtcgcgatcaaggacaacaagtccggcaacgtcgagtcc
gtggtcgtcgacaaggtcatgcagtccgtcgggttcgccccgcgggtggagggcttcggc
ctcgagaacaccggtgtcgagctcaccgaccggggcgccatcgccatcgacgacgtgatg
cgcaccaacgtgccgcacatctacgccatcggcgacgtcaccgccaagctcatgctcgcg
cacgtcgcagaggcgatgggcgtggtcgcggccgagaccatcggcggcgccgagaccctc
accttcgacgactaccggatgatgccgcgtgcgacgttctgccagccgcaggtcgccagc
ttcggactgaccgagcagcaggcgcgcgacgagggttacgacgtcaaggtcgccaccttc
cccttcaccgcgaacggcaaggcccacggcctcggcgatcccaacggcttcgtcaagctg
atcgccgacaacaagcacggagagctgctcggcggccacctgatcggccccgacgtctcc
gaactcctgcccgagctgaccctcgcgcagaagtgggacctgacggtcaacgaactggcc
cgcaacgtccacacccacccgacgctgagcgaggcgctgcaggaggccatccacggcctc
gcaggccacatgatcaacttctga

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