Rhodococcus sp. AH-ZY2: QNA09_17820
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Entry
QNA09_17820 CDS
T10477
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
rhoy Rhodococcus sp. AH-ZY2
Brite
KEGG Orthology (KO) [BR:
rhoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhoy03000
]
QNA09_17820
Transcription factors [BR:
rhoy03000
]
Prokaryotic type
Helix-turn-helix
Other families
QNA09_17820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
AAA_lid_14
GAF
HTH_50
Sigma54_activat
nSTAND3
HTH_7
AAA
AAA_5
AAA_16
CID_GANP
ABC_tran
NPHP3_N
HTH_28
HTH_30
Sigma54_activ_2
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WML61707
LinkDB
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Position
complement(3671009..3672844)
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AA seq
611 aa
AA seq
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MHHDHTGAGRPVKSADRRLRVAVARAGFLDSGEPDDSLVSSVVSASWRRSAAAGVRPSGG
EVRFAGEVDRTSRLVQCSLPVLDRLAEETVDVPVSIALTDAKAQVLMRLDGARAIGRLLD
HVSLAPGFDYNEGQIGTNGVGTVLESGRAVQIEGAEHFHERFQPFACSGAPIRDPFSGRV
AGVIDISCLTEHSSPLLTTVVRTAAAEIEQNLFRDRSARQHALFDAFVRADARGGAALMA
IGSAMSLANPLAHTLLAPEDQRRVGEHVDYVIGHRARIDELLELSTGLSVRVRATRILAG
EDTAGYLVEVSEAAAAAAPLPPVPNRVREHRMHSGRVGLAAAGTDRLRSSGSSALWMRAC
DEIEEALSAGAKLLLTGEPGTGKASLASEIFHSLYAGGRSILVDGSETDLSGLTVPSANP
TLYVLRNIQAMPGPLTATLAETLAEPVAEHVFVVATMEESEEPPSEALAPLLAALDRTVH
VPALRHRTDDIAGVAAQVLRKITGSQSRTVAPDAMRVLTRYPWPRNIHELEAALRCAVAH
RPAGAITVEDLPEWCRHGPRRQLNAVESAERDLIAKVLRETGGNRVHAARALGISRSSLY
RKLTLFGFTGE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacgaccacaccggggcggggcggccggtgaagagcgcggaccgacggctgcgg
gtggcggtggcccgggccggattcctcgactccggcgaaccggacgattcgctggtctcc
tccgtcgtgtcggcgtcgtggcgacgctccgccgcggcgggcgtgcgaccgtccggtggg
gaggtccggtttgcgggtgaggtcgaccggacctcccgcctggtccagtgctcgctgccg
gttctggaccggctcgcggaggagaccgtcgacgtcccggtgagcatcgccctgaccgac
gccaaggcgcaggtgctgatgcgactcgacggtgcccgggccatcggacggctgctcgac
cacgtctcgctcgcaccgggcttcgactacaacgagggccagatcggcacgaacggtgtc
ggcacggtgctcgaatccgggcgtgccgtgcagatcgagggcgccgagcacttccacgaa
cggttccagccgttcgcctgctccggcgcgccgatccgggacccgttcagcggacgggtc
gccggcgtcatcgacatcagctgcctcaccgagcattcgtcgccgctgctgacgaccgtc
gtgcggaccgcggcagcggagatcgaacagaatctgttccgcgaccgcagcgcccgccag
cacgcgctgttcgacgcgttcgtgcgcgccgacgcccgcggcggcgcggccctcatggcg
atcgggagcgcgatgtcgctcgcgaatccgctcgcccacaccctcctcgcgccggaggac
cagcgccgggtcggtgagcacgtcgactacgtcatcgggcaccgcgcgcgaatcgacgaa
ctgctcgagctgagcaccggcctgtccgtccgggtccgggccacccggatcctggcgggc
gaggacaccgccggatacctcgtcgaggtctccgaagcggccgcggccgcggcaccgctt
ccgcccgttccgaaccgcgttcgcgagcaccgcatgcactccggacgggtcggtctggcc
gcggccggcacggatcgtctccgctcgagcggttcctccgcgctgtggatgcgcgcctgc
gacgagatcgaggaggccctgtccgccggggcgaagctactcctcaccggcgagccgggc
acggggaaggcctctctcgcgtccgagatcttccattccctgtacgccgggggacggagc
atcctcgtggacggtagcgagaccgatctgtccggactcacggtgccctccgccaacccc
accctgtacgtgctgcgcaacatccaggcgatgcccggcccgctcacggccaccctggcc
gagaccctggcggaacccgtcgccgagcacgtcttcgtcgtggccaccatggaggagtcc
gaggagccgccgtccgaggccctcgccccgctgctcgcggccctcgaccggacggtgcac
gtgcccgccctgcgacaccgcaccgacgacatcgcaggagtcgcggcccaggtcctccgc
aagatcaccggatcgcagagccgcaccgtcgctcccgacgccatgcgggtgctgacacgc
tatccgtggccgcgtaacatccacgagctcgaagcggcgttgcgctgcgccgtcgcgcac
cggcctgccggtgccatcaccgtcgaggacctacccgaatggtgccggcacggtccgcgt
cgccagctcaacgcggtcgagtccgccgaacgggatctcatcgccaaggtcctgcgggaa
accggtggcaaccgggtgcacgccgcccgcgccctgggaatctcccggtcgtcgctgtac
cggaaactgaccctgttcggtttcaccggcgagtag
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