Rhodococcus sp. AH-ZY2: QNA09_27930
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Entry
QNA09_27930 CDS
T10477
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rhoy Rhodococcus sp. AH-ZY2
Pathway
rhoy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QNA09_27930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhoy03400
]
QNA09_27930
Enzymes [BR:
rhoy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
QNA09_27930
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
QNA09_27930
DNA repair and recombination proteins [BR:
rhoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
QNA09_27930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
WML66444
UniProt:
A0AA51QNI8
LinkDB
All DBs
Position
unnamed3:87967..88833
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AA seq
288 aa
AA seq
DB search
MPELPEVEALAGFLREHAVGAVIGRIDIAALSVLKTFDPPITELQGQDVTDAARFGKHLA
LRAGDLWLITHLSRGGWLRWVDNPSAAPPKPGKGPLALRIHFFTPEGATPAIDLTEAGTK
KRLAVWVVRDPAQVASVARLGPDALTVTELEFAEILAGTTARLKTSLVDQSLLAGIGNAY
SDEILHVAKLSPFASSSKLDPESVATLYASMRSVLSDAVARSAGQDAARLKGEKRSGMRV
HARTGLPCPVCGDPVREVAYVDRSFQYCATCQTAGKILADRRMSRLLK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattgcccgaggtcgaagcccttgccggcttcctgcgcgaacatgccgtcggt
gccgtcatcggccgcatcgacatcgccgcgctgagtgttctcaagacgttcgatccgccg
atcaccgaactgcagggccaggacgtcaccgatgccgcgcggttcggtaaacacctggca
ctgcgggccggcgacctgtggttgatcacgcatctctcgcgcggcggttggctgcggtgg
gtggacaatcccagcgccgcgccgcccaagcccggcaaaggtccgttggcactgcggatc
cacttcttcactcccgaaggcgcgacgcccgccatcgacctcaccgaagccggtaccaag
aagcgattggcggtctgggtggtccgtgaccctgcgcaggtggcgagcgtcgctcgcctc
ggacccgatgcgctgacggtcaccgagctcgagttcgccgaaatactcgccggcaccacc
gcgcgactgaagacctcgttggtggaccaatctctgttggccggtatcggcaacgcgtac
tcggacgagatattgcacgtcgcgaagctctcgccgttcgcgtcgtcgagcaagctcgat
cccgaatccgtcgcgacgctctacgcgtcgatgcgctcggtgctgtccgacgcggtggcc
cgctcggccgggcaggacgcggcgcggctgaagggggagaagcgatctggtatgcgggtg
cacgccagaactgggctgccgtgcccggtgtgcggagatccggtacgcgaagtcgcgtac
gtcgatcgatcgtttcagtactgcgccacgtgccagacggccggcaaaattcttgccgac
cgtcgaatgtcacgtctgctcaagtga
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