Rhodocytophaga rosea: GXP67_03635
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Entry
GXP67_03635 CDS
T06412
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rhoz
Rhodocytophaga rosea
Pathway
rhoz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXP67_03635 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoz03019
]
GXP67_03635 (pnp)
03016 Transfer RNA biogenesis [BR:
rhoz03016
]
GXP67_03635 (pnp)
Enzymes [BR:
rhoz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GXP67_03635 (pnp)
Messenger RNA biogenesis [BR:
rhoz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GXP67_03635 (pnp)
Transfer RNA biogenesis [BR:
rhoz03016
]
Prokaryotic type
tRNA degradation factors
GXP67_03635 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_2
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QHT65821
UniProt:
A0A6C0GCX2
LinkDB
All DBs
Position
complement(835195..837336)
Genome browser
AA seq
713 aa
AA seq
DB search
MLPNVITKTIELADGRKITIETGKLAKQADGSVVVRMGDTMLLATVVANQEAREGIDFLP
LSVDYQEKFAAAGKIPGGFLRREGRLSDHEILVSRLVDRALRPLFPDDYHAETQVNIFLI
SADQNVLPDSLAALAASSALAVSDIPFNGPISEVRVAKIDGQYLVNPPADQLSKATLDLI
VAASYDDITMVEGEMNEVSEEEVLEALKTAHEAIKLQVQAQRELTELVGKTQKRVYSHEV
NDSVLKEQLYLLLYEKAYAVAKSTIINKHERSEAFKAIKQAYIDSLPEDHTIDLALVSKY
YHDIEKDAARNLVLNEGVRLDGRKPDQIRPIWSEIDYLPSAHGSAIFTRGETQSLTTVTL
GTKLDEQMIDSAMLSGFNKFILHYNFPGFSTGEVKPNRGPGRREVGHGNLAHRALKKVLP
PDEENPYTLRVVSDILESNGSSSMATVCAGTLALMDAGIKIKAPVSGIAMGMISDSKTKK
YAILSDILGDEDHLGDMDFKVTGTAKGITACQMDIKVDGLSYEVLAQALAQAKQGRLHIL
GEMNKTLAEPKPDLKPNAPRSVTVKIDRDQIGAVIGPGGKVVQDIQKESGATVVIEERDN
AGYVNIFAVDKVAMEKALRRVKGIVAIPTIGDVYEGKVKSIMPFGAFVEFMPGKDGLLHI
SEIKWERLEKMEGVLEVGEEVKVKLVDVDKKTGKYRLSRKVLLPKPEGKTANS
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttaccaaatgtaatcaccaaaaccattgaactcgccgatggtagaaaaataactatt
gaaaccggtaaacttgctaaacaagctgatggctctgttgtcgttcggatgggcgatact
atgttgctggctacagtagtggccaatcaggaagcccgggagggcatcgattttttgcct
ttatcagtagactaccaggaaaaatttgcggcggcaggaaaaatccctggtggattcctt
cgtcgcgaaggcaggctctcagaccatgaaattctggtaagccgcctggtagaccgtgcc
ttacgtccgctttttcccgacgattaccatgctgaaacacaggtaaatatttttttaatt
tcagctgatcagaatgtattgccagattctctggctgcccttgccgcttcttctgccctt
gccgtttcagatattccttttaatggccctatttcagaagtaagagtagccaaaatcgat
ggccagtacctggttaatcctcctgctgaccagctcagtaaagctacccttgatctgatt
gtggccgcttcctacgatgatattaccatggtagaaggagaaatgaacgaagtatctgag
gaagaagtgctggaagctttgaaaactgcccatgaagccatcaaacttcaggtgcaggcc
cagagagaattaactgaactggtgggtaaaacccagaaaagagtgtactctcatgaagta
aatgattcagtactaaaagaacaattatatttattgctgtatgaaaaagcttatgctgta
gccaaatctactattattaataagcatgagcgcagtgaagcttttaaagcgataaaacaa
gcctatatagattccttacctgaagatcataccattgacctggccctggtaagtaaatat
taccatgatatagagaaagatgccgccagaaacctggtgctcaatgaaggtgtacgtctg
gatggccgcaaaccagaccagatccgtccgatctggagtgaaattgattatttgccttct
gcgcatggatcagccatttttacccgtggcgaaactcagtctctcactacggttacgctg
ggcaccaagctggacgaacagatgattgacagtgccatgctaagtggattcaataaattt
attctgcattataattttccaggtttctctaccggcgaagtaaaacctaaccgtgggccg
ggtaggagagaagtagggcatggaaatctggctcaccgggcactcaagaaagtactgccg
ccagatgaagaaaatccatataccctgcgggtggtatcagatattctggaatcgaatggt
tcttcttccatggctactgtttgcgccggtacactggcgctaatggacgctggtatcaaa
attaaagcgcctgtttccgggatagcgatggggatgatctctgatagcaagacaaaaaaa
tatgccatcctgtctgacatcttaggggatgaagatcacctgggcgatatggattttaaa
gtaaccggtacagccaaaggaattactgcctgccagatggatattaaggttgatggatta
tcttacgaagtcttggctcaggcacttgcccaggccaaacaaggcagactgcacatttta
ggagagatgaacaaaacccttgccgaaccaaaaccggatctgaagccgaatgctccccgc
tcagttactgttaaaattgaccgtgatcagattggagccgttatcggacctggtggtaaa
gtggtacaggatattcagaaagaatctggcgcaacggtagtgattgaagaaagggataat
gcagggtatgtaaatatttttgctgtagataaagtagcgatggagaaagcgctgagacgg
gtaaaaggcatagttgccattccaaccataggcgatgtatatgaaggaaaggtaaaatct
ataatgccctttggtgcatttgtagaatttatgccaggcaaagatggactgctgcatatt
tctgaaatcaagtgggaacgcctggaaaaaatggaaggtgtattggaagtaggagaggaa
gtaaaagtgaaactggtggatgtagataaaaaaaccggtaaatacaggctttccagaaaa
gtattactgcctaaaccggagggtaaaacggctaactcctga
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