Rhodocytophaga rosea: GXP67_06120
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Entry
GXP67_06120 CDS
T06412
Name
(GenBank) hypothetical protein
Organism
rhoz
Rhodocytophaga rosea
Brite
Glycosaminoglycan binding proteins [BR:
rhoz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
GXP67_06120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7151
Collagen
DUF6087
Motif
Other DBs
NCBI-ProteinID:
QHT66263
UniProt:
A0A6C0GER4
LinkDB
All DBs
Position
complement(1438988..1443367)
Genome browser
AA seq
1459 aa
AA seq
DB search
MSKFYLPKINVIKTSISIICLFLLSYYVDAQNTVGVGTNTPNKHAVIDIVSPSNNQGVLL
PRLTTAQRTDIQFTSSLTSADNGLIVFDSNSKKFYYWKDTQWVEGLSSTVTSTNGSIWHS
GNGIPINSLGNEGDFYIDINSGDVYEKVDGVYSKKLNIKGDIGPQGTQGLKGEKGDVGPR
GSKGDAGPQGLKGEKGDPGTQGLTGLQGQKGDTGATGPQGDKGQKGDKGDTGAQGPQGIQ
GLQGAQGGKGDKGDIGDSGVQGMQGEKGDKGDKGEIGLPGPVGATGATGPQGVKGDKGDI
GPQGLKGATGDKGDTGDTGIQGPQGQQGLPGFAGTNGINGYNSLSKTTIEAAGVNCVSGG
QKIESGQDLNRNNILDAAEITSTSYVCNGAQGIKGENGDKGDTGPQGIAGVNGLDGKSIL
NGAINPLSTIGINGDFYINITTNTLFGPKTSGNWGSGLALIGPKGDTGAQGMKGDTGSQG
VQGIKGDTGDTGVQGPQGIQGEKGDKGDTGAQGLTGSQGQKGDKGDQGDIGPQGLIGATG
AKGDKGDIGDQGIQGLQGPQGGIGPKGDKGDQGDTGPQGLTGINGTNGFNSLTKITNESI
GINCVNGGQKVESGLDINSNNILDAGEISSTSFVCNGIQGPTGTNGINGSNGYNSLTKTT
AEPLGVNCVSGGQKIESGQDLNRNNILDVVEITSTSYVCNGAQGLVGATGLKGDKGDQGI
QGFIGSTGSKGDKGDKGDTGLQGIQGETGPQGQKGDTGDTGLQGPQGPVGAIGLQGPKGD
LGNIGPQGIQGEVGPIGATGPQGSQGTKGDKGDKGDTGDVGPQGPQGLPGLAGTNGINGY
NSLSKTTLEAAGVNCVSGGQKIESGQDLNRNNILDAAEIISTSYICNGLQGLVGATGLKG
DKGDIGVQGPQGIKGDNGDTGLQGPQGIQGVKGDQGDVGAQGPKGDKGDIGTQGPQGLQG
IAGVGGTNGISSLSKTTAELSGVNCVNGGQKIESGLDINANNILESTEVSSTTYVCNGTN
NINSAGTGINISGGVISNSGDTNAADDITTSSTAGGDLSGTFSNLQLKSNAVTTNVIANN
AVTVSKIGTAGLFDGNKVLTTDILGNPYWGVFPTLGGDITSVNAGTGLTGGALSNDATLS
IAPGGVGTTQLALNAVTTNQIMDGTISTNDLADGSVTAVKIQNGNVSAAKINADVAGNGL
GKNGTDESLEVNVAASGGIEIVADQLQLTNVGTSGTYGSSTQVPVLTTDSKGRVTNITNT
TISASGDVTGNLNSTTVSRLQGRPVANTAPATNQILTWDGTQWAPQTYITGTLNGGTTNY
IPKWTSSTTLSSTSQVYDNGTNVGIGTNTPGTKLEVDGALSVTPGIITSGLSSFNVIVGN
NTFIKITGTNTNDQNVSLANGIKPGQILIIAAYQTNDKKLKFNDSGNLNLAGDKDLKHEE
TLTLIWDGNKWLQLSYSSN
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattttacttgcctaagataaatgtaataaaaaccagtataagtattatatgt
ttatttctgttgtcttattatgtagatgctcaaaatacggtaggagttgggacaaatact
ccaaataaacatgcagtaatagatatagtttcaccttctaataatcaaggtgtacttctt
cctcgtcttactactgcacagcggacagacattcaatttacttcctctttaacttcagcc
gataacggattaatcgtttttgattctaatagtaagaaattctattattggaaagataca
caatgggtggaaggcttaagtagtacagtaacttctactaatgggtcaatatggcattca
ggcaatggaataccaatcaatagtttgggtaatgagggtgatttctatattgatattaat
tccggtgatgtatatgagaaagttgatggtgtgtatagtaagaaacttaatattaaagga
gacataggaccacagggcactcagggcttaaagggagagaagggtgatgtagggccacga
ggatcaaaaggggacgcagggccacagggattgaaaggcgagaagggtgatccgggaaca
caaggtcttactggcttacaaggacagaaaggagatacaggtgctaccgggcctcaaggt
gataaaggccagaagggcgacaaaggagatactggagcgcaagggccgcagggaattcaa
ggtttacagggtgcccaaggagggaagggcgacaagggagatataggtgatagtggtgta
caaggcatgcaaggagaaaagggcgataaaggggataagggggagataggtttaccagga
cctgttggtgctacaggcgctaccgggcctcaaggagtaaaaggggataaaggcgatatt
ggtccacaaggtttgaaaggtgctactggggacaaaggagacacaggtgatacaggtata
caaggacctcaagggcaacaaggcttgccgggatttgccggcacaaatggtataaatggc
tacaatagtttaagtaaaactaccatagaagcagcaggtgtaaattgtgtcagtggtgga
cagaagattgaatccggccaggatctcaaccggaacaacattctggatgctgctgaaatc
acttctacttcttatgtctgcaatggtgcacaaggaataaaaggcgagaatggggacaaa
ggagatactggcccgcaaggaatagctggggtaaatggcttagatggaaaaagtatcctg
aatggagctatcaatccactatccactattggaattaatggagatttttacatcaatata
actaccaacacattatttggtcctaaaacaagcggtaattggggaagcggcctggcttta
ataggccccaaaggagatactggtgcacaaggcatgaaaggggatactggttctcaaggt
gttcaaggtattaaaggcgatacaggagataccggtgtacagggacctcaaggtatacag
ggagaaaaaggcgacaagggtgataccggagcacaaggtcttactggtagccaaggacaa
aagggggataaaggagatcagggcgatatagggcctcaaggtctaataggagctacgggt
gctaaaggggacaagggcgatataggggaccaagggattcaggggttacaggggcctcaa
ggaggaataggccccaaaggagacaaaggcgatcaaggagatacagggccgcaaggactt
accggaataaatggtacgaatggctttaatagcttaacaaagattactaatgaatctatt
ggtataaactgcgtgaatggtggacaaaaagtagaatcaggcttagatatcaatagtaac
aacatattggatgcaggtgaaatttcttctacttcttttgtttgtaatggaatacaagga
cccacaggaacgaatggtatcaatggatcaaatggttataacagcctaacaaaaactacc
gctgagccattgggtgtaaattgtgttagtggcggacagaagattgaatctggccaggat
ctcaaccggaacaacattctggatgttgttgaaatcacttctacctcttatgtctgcaat
ggtgcacaaggtctggttggtgctacagggttgaaaggagataaaggagatcaaggtatt
caaggttttataggatcaacaggatcgaaaggcgataagggggacaaaggagatactggc
ctgcaaggaatacaaggagaaactgggcctcaaggacaaaagggggatacaggtgataca
gggctacaaggtccgcagggtcctgttggagctatagggttgcagggaccaaaaggagat
ctcggtaatataggtccacaagggattcaaggagaagtaggcccgattggtgctactggt
ccacaaggatctcagggcacaaaaggagacaaaggagataagggggatacaggtgatgta
ggcccacaaggacctcaaggcttgccgggacttgccggcacaaatggtataaatggctac
aatagtttaagtaaaactactttagaagcagcaggcgtaaattgtgtcagtggcggacag
aagattgaatccggccaggatctcaaccggaacaacattctggatgctgctgaaattatt
tctacttcttatatatgtaacggtttgcaaggcctggttggtgctacagggttgaaagga
gataaaggcgatataggtgtccaaggcccacaaggtattaaaggggacaatggcgacacc
ggactacaggggcctcagggcatacaaggagtaaaaggagatcagggtgatgttggggca
caagggccaaaaggagacaaaggggatattggtacacaaggacctcagggcttgcaaggt
atagctggtgtaggtggcaccaatggaattagtagtttaagcaaaactacagccgagctt
tcaggcgtaaattgtgtgaatggcggacagaagatagagtcaggtttagatataaatgcg
aataatatcttagagtcaaccgaagttagttctactacctatgtgtgtaatggtacaaac
aatattaattcagccggtacaggtatcaacatcagtggaggggttatttcaaactcaggt
gataccaatgccgctgatgatataactacatcctcaacagcaggaggcgacctgtcgggc
acattctcaaatctacagctaaaatcaaacgctgttactacaaatgtgattgcaaataat
gcggtgacagttagtaaaatcggtacagcaggcctgtttgatggaaataaggtattaact
acagatattttaggcaacccttactggggcgtttttcctacgttaggaggagacattaca
tctgttaatgccggtactggcttaactggaggagcgttaagcaatgatgccactctctcc
attgctcctgggggagtaggcactacacagcttgcattaaatgcggttactaccaatcag
ataatggatggtacaatcagcaccaatgatttagcagatggctctgtaactgctgttaaa
attcagaatggaaatgtgtctgctgcaaagatcaatgcagatgtggccggtaatggttta
ggtaaaaatggaacagatgagagtctggaagtaaatgtagccgcttcaggaggcattgaa
atagttgccgaccaactgcaattaacgaatgtaggtacatccggtacctatggaagttcc
acacaagtgcctgtactaacaactgattcgaaaggtagagtaacgaatattaccaataca
actatttcagcatcaggagatgtaacaggaaatttaaattcaactactgtatccaggtta
caaggcaggcctgtggccaatacggcaccggcaactaaccaaattttaacctgggatggc
actcaatgggcacctcaaacttatattaccggcactctaaatggtggtactactaattat
attcctaagtggacttcttcaactacgttatcatctacttctcaagtttatgataatggt
accaatgtaggtattggaaccaatacaccaggaaccaagctggaagtagacggtgcatta
tctgtaactcctggtataattacttctggcctttctagttttaatgtaatagtcgggaat
aatacttttataaaaatcacaggtactaataccaatgatcagaatgtttcactcgctaac
ggcattaagccggggcagatcttgattattgctgcgtatcagaccaatgacaaaaagctt
aaattcaatgatagtggaaacttaaatttagccggcgataaggatttgaaacatgaagaa
acacttacacttatatgggatggtaataaatggttgcaattaagttattcaagtaattga
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