Rhodocytophaga rosea: GXP67_08300
Help
Entry
GXP67_08300 CDS
T06412
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
rhoz
Rhodocytophaga rosea
Pathway
rhoz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXP67_08300 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoz03019
]
GXP67_08300 (rny)
Messenger RNA biogenesis [BR:
rhoz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GXP67_08300 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF4954
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QHT66658
UniProt:
A0A6C0GFC3
LinkDB
All DBs
Position
complement(1971996..1973582)
Genome browser
AA seq
528 aa
AA seq
DB search
MPDLAYTLITSIFALGAGVLIGRILLRRVFKKKEEEAREKARQIVKEAELSAENIKKDRI
LEAKEKFLKLKAEFEEESNKKKQIIITNENKLKQREQSLVQKEQNIAKMLEQNKRREAEL
DSLKENLTEQMDIAGKKRDEAEKLRTSQVAKLEKIANLTADEARDQLVEALKDEAQTRAS
SYIKNIVEEAKLTATKEAKKVVIETIQRTATEHAIENCVSIFNIESDDIKGKIIGREGRN
IRALEAATGVEIIVDDTPEAIIISGFDPVRREVARLSLHRLVQDGRIHPARIEEVVAKTQ
KNIEDEIVEMGERTVIDLGIHGLHPELIKLVGRMRFRSSYGQNLLQHSREVAKLCATMAS
ELGLNAKMAKRAGLLHDIGKVWPEEPELPHAILGMELAKKYKEHPEVCNAIGAHHDEIEM
TSIISPIIQTCDAISGSRPGARREVMESYIKRLKELEELAVAFQGVTKCYAIQAGRELRV
MVDAENVTDEKANLLSYDISQKIEKDMQYPGQIKVTVIREMRAVSYAK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgccagacttagcgtacacgttaataaccagtatcttcgccttaggggcaggagtactg
attggaagaatactgttgcggagagtattcaaaaagaaagaagaagaagcccgcgagaaa
gccagacaaattgtgaaggaagctgaactcagtgccgaaaatatcaagaaagaccgcatt
ctggaagccaaagagaaatttttaaaactaaaagctgagtttgaggaagaatccaataag
aagaagcagatcattattaccaacgaaaataaactcaagcagcgggaacaaagtctggtt
cagaaagagcagaacatcgccaaaatgcttgagcagaacaaacgccgggaagccgaatta
gatagcctaaaagaaaacctgaccgagcaaatggatatagccgggaagaaacgggacgaa
gccgaaaaattacgtacttcacaggtagccaaattagagaaaatagccaatcttaccgcc
gacgaagcccgtgatcaactggtagaagccctgaaagatgaagcccaaacccgtgcttct
tcttatatcaaaaacatcgtagaagaagctaaacttactgctaccaaagaagccaaaaaa
gtagtaatcgaaaccattcagcgcacggctactgagcatgcgattgagaactgcgtatca
atttttaacatagaaagcgacgatataaaaggtaaaatcatcggacgggaaggccggaat
atacgtgccttggaagctgcaaccggtgttgaaattattgtagacgatactcctgaagcc
attattatttccggttttgatccggtacgccgggaagtggcccgcttgtcgttgcaccgc
ctggtacaggatggacgtattcacccggcacgtatcgaagaggtagtagccaaaacccag
aaaaacatcgaggatgaaattgttgaaatgggtgaacgtaccgtgattgacctgggtata
catggcctgcatccggagttaattaaactggtaggccgtatgcgtttccggtcttcttat
gggcaaaacctgttgcagcactcccgggaagtagcaaaattatgtgctacgatggcatct
gaattaggcttgaatgcaaagatggccaaacgtgccggattgctgcacgacattggcaaa
gtatggccggaagaaccagaattgccacacgctattctgggcatggaactcgccaaaaaa
tacaaggaacacccagaagtgtgtaatgccattggcgctcaccacgatgaaattgaaatg
acttccattatttcacccattatccaaacctgtgatgccatctccggttcaaggccaggt
gcccgccgggaggtaatggaatcatacatcaaacggttgaaagaactggaagaactggct
gtagcgtttcagggcgtaaccaagtgctatgctattcaggctggccgtgaattgcgggta
atggtagatgccgaaaacgtaaccgacgaaaaagccaatttgctctcctatgatatttcc
cagaaaattgagaaggacatgcaataccccggccagatcaaagttaccgttatccgtgaa
atgcgggcggtaagttatgctaagtaa
DBGET
integrated database retrieval system
